Malurus melanocephalus (red-backed fairy wren): 130577594
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Entry
130577594 CDS
T09178
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmea04121
]
130577594 (RNF38)
Enzymes [BR:
mmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130577594 (RNF38)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130577594 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130577594
NCBI-ProteinID:
XP_057229060
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MPVAARSAAPGAQPDAGFLXPARRRDRGVAPRGEESGGERHLRQAGEAGRRGRWVASSAA
PFLPAFSSSPPPPPASSVASSPAAGAAVAASTSPSAASLLPALPRTRARVRSRSGFPGLA
MSGGSGRLPPPAALCPPPPLHGPSLPEAGARSQGRGSPAGHGAPRGALGARAPPPGSIGT
SFQCHSIHQDHICTDDSDKSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQP
PLARPSQHHFSGERCNTPARNRRSPPVRRQRTRRDRLSRHNSISQDENYHHLSYGQQQAI
EEPRAFRPPNVSPRMLHPAAHPPQQNAVMVDIHDQIHQGTVPVSYTVTTVAPHGIPLCTG
QHIPACSAQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH
PPHISTHHPPHLPPPGQFVPFQAQQSRSPLQRIENDVELLGEHLPVGGFTYPPSAHPPTL
PPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPHPYHPSLLPYVLSM
LPVPPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN
HQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggccgcccgctcggcagcccccggggcccagcccgacgccgggttcctcgsc
cctgcccgccggcgggaccgcggcgtcgctccgcgcggcgaggagagcggcggcgagcgg
cacctccgtcaggccggcgaggcgggccggcgcggcagatgggtggcttcttccgccgcc
cccttcctgcctgccttctcctcctcccctccgccgccccccgcctcctccgttgcctcc
tcccccgctgctggggccgccgtcgccgcctccacctccccctcggctgcctcccttctc
ccggcactcccccggacccgcgcccgcgtccgctcccgctccggctttccgggactcgcc
atgagcggcggttccggtcgcttgccgccgcccgccgccctctgcccgccgccgcccctc
cacgggccgagcttgccggaggcgggagcgcggagccagggccggggcagccccgccggg
cacggcgcaccccgcggcgccctgggcgccagagccccgccaccaggtagtattggtaca
tcgtttcaatgccactcaatccatcaagatcacatttgtactgatgatagtgacaagagt
gaagacagtcctagtcccaagcgacaacgcctttcccattcagtctttgactatacagca
gcgtcaccagccccatcaccaccaatgcgaccatgggagatgacatcaaataggcagcct
cctttggctcgacccagccaacaccacttctcaggggaacgatgcaacacgcctgcacga
aacaggaggagtcctcctgttcgacgtcagagaacaaggagagatcgcttgtctagacat
aattctattagccaggatgaaaactatcaccatctctcctatggacagcaacaagcaata
gaagagcctcgagcctttcgcccaccgaatgtatctcctcgtatgttgcacccagctgct
cacccaccacagcagaatgcagtgatggttgacattcatgatcagatccatcagggcaca
gttcctgtttcatacacagtgacaactgtggctccgcatgggataccactttgcacaggc
cagcacattccagcctgcagcgcacagcaggttccagggtgctcggtggttttcagtggc
cagcaccttccagtttgcagtgtgcctcccccaatgcttcaggcgtgctcagtccagcac
ctaccagtaccatatgcagcatttccacccctcatttctagtgacccattccttttgcat
cctcctcatatctctacacaccaccctcctcacttacctcctccaggacaatttgttcct
ttccaagcacagcagtcacggtcgccacttcaaagaatagaaaatgacgtagaattgctt
ggagaacatcttcctgtaggaggttttacataccctccctcagcccatccaccaacgttg
cctccctcagctcctcttcaattcttaacccatgatccattacaccaggaggtgtcattc
ggtgtaccttacccaccttttatgcctcgaagactcacagggcgcagcagataccgatca
cagcagccaataccaccacacccttaccatcccagcctattaccttatgtgctatcaatg
ctcccagtgccacctgcagttggaccagctttcagctttgagttggatgtggaagatgga
gaggtagaaaactatgaggcactrctgaatttggcagaacgtctgggagaagccaaacca
cggggattaacaaaagcagacattgagcagcttccatcttataggttcaatccaaacaat
caccagtcagagcagacattatgtgtggtgtgcatgtgtgattttgagtcaaggcagcta
cttagagtcttaccctgtaaccacgagttccatgccaagtgtgtcgataaatggctgaag
gcaaatcgtacatgcccgatttgtagagctgatgcttcggaagtgcatcgtgattcagaa
tga
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integrated database retrieval system
