Malurus melanocephalus (red-backed fairy wren): 130578097
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Entry
130578097 CDS
T09178
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
130578097 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmea04121
]
130578097 (RAG1)
Enzymes [BR:
mmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130578097 (RAG1)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130578097 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130578097
NCBI-ProteinID:
XP_057229939
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MSAASQMDLPEELQHPHIKFSEWKFKLFKLRSFEKAASDDSQHINKDQAEEAASSNKEVI
LQNDEAVPRGXKIKIAGDRQGLEENAHAMKTQDNRAHQNNLKQLCRICGVSFKTDCYKST
YPVHGPVDDETLXLLRKKEKTATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWSIIHRK
FSNTLCEVYFPRNSTMEWQPHSPNCDVCHITRQGVKRKSQPPSVQRGKRVKTTGERARLN
RGVKNQAQINNKNLMKEIVNCNDIHLSTKLLAIDYPVDFIKSISCQICEHILADPVETTC
RHLFCRTCILKCIRVMGSYCPSCWYPCFPTDXVTPVKSFLSILDNLSIRCPVKECGEEIL
HGKYGQHLSSHKEIKDRELYSYVNKGGRPRLHLLSLTRRAQKHRLRELKRQVKAFAEKEE
GGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYHK
MYRTVKAVTGRQIFQPLHXLRNAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPL
SIDDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKAKNLDDYLNGPFTVVVKESCDGMG
DVSEKHGXGPAVPEKAVRFSFTVMNISIAHGNESTRIFEEVKPNSELCCKPLCLMLADES
DHETLTAILSPLIAEREAMKNSELLLEMGGILRTFRFVFRGTGYDEKLLREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKP
FIETVPXIDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRKKMNL
KPMLKMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECP
ELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKVYEMEDVLKHHWLYTSKYLQKFMNAHKTLKKQSFXIDSGCSLG
DSLPLVDLENNDSAEF
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcatcacaaatggatctgcctgaagaacttcagcatccacatataaaattt
tcagaatggaaattcaagctctttaaattgcgatcatttgaaaaagcagcctctgatgac
agtcagcacataaacaaagatcaggcagaagaggctgcttcttcaaacaaagaagtcatc
ctgcaaaatgatgaggctgtgccaagaggagraaagattaagatagcaggtgataggcag
ggacttgaggaaaatgcccatgccatgaaaacacaagacaatagagctcatcagaacaat
ctgaagcaactctgccgcatctgtggagtttcatttaaaactgattgctacaaaagcact
tacccagtgcatgggccagtggatgatgaaactctgtgscttctgagaaagaaagaaaaa
acagcaacctcttggccagatcttattgctaaggttttcaagattgatgtgcgaggggat
gtygatactatccaccccactcgattctgtcacaattgttggagtattatacatagaaaa
ttcagtaatactttatgtgaagtgtattttcctaggaacagcacaatggagtggcaaccc
cactccccaaactgtgatgtgtgccatattaccaggcaaggagtcaagagaaaaagccag
cccccaagtgtgcaacgtggcaaacgtgtcaaaaccactggggaacgcgctcggttaaac
agaggtgtaaagaaccaagcacagataaacaacaaaaatttgatgaaagagattgtcaat
tgcaatgatatacatctcagcaccaagctgcttgcmattgattacccagtagatttcatt
aaatccatttcttgccagatttgtgagcatattttggcagatccagtggaaacaacatgc
agacacttgttttgcagaacttgcatccttaagtgtatcagggttatgggcagctattgc
ccctcctgctggtatccttgctttcctactgatstggtaaccccagtgaaatcctttctg
agtatccttgataacctgagtattagatgccctgtaaaggaatgtggtgaagagatcttg
catggaaaatatggccagcacctctccagccacaaggagatcaaagatagagagctctac
agctacgtaaacaaaggtggccgaccaaggcttcacctcctgtctttgacaaggagagct
cagaaacatcgtctgagggaactgaaacgtcaagtcaaggcttttgctgagaaagaagag
ggcggtgatataaaggctgtgtgcatgactttgttcctgctagctttgagagcaaaaaat
gaacacaaacaagcagatgaactggaagctataatgcaagggaggggatctggacttcat
cctgctgtctgtctggcaatccgagtcaacacatttctcagctgtagtcagtatcataaa
atgtatagaacagtaaaagctgtcactgggaggcagatcttccagcctctgcatrctctt
cgcaatgctgagaaagccctcttaccaggttaccacccattygagtggaaacctcccctg
aaaaatgtatccactaacacagaagtgggaattatagatggactatcaggactgccactc
tcaattgatgattacccagtagacacaattgcaaagagatttcgatatgatgcagccctg
gtttgtgccttaaaggacatggaggaggagatcttggaaggcatgaaagcaaaaaacctg
gatgattatttgaacggccccttcactgtggtagtgaaagagtcctgtgatggaatggga
gatgtcagtgagaagcatggaastgggcctgctgtcccagagaaggctgttcgcttttct
ttcacagtcatgaacatctctatagcacatggcaatgaaagcacaaggatctttgaggaa
gtaaagcccaattcagagttgtgctgtaagcccttgtgccttatgctggctgacgaatca
gatcatgaaactctgacggcaatcctgagccccctcatagcagaaagagaggctatgaaa
aacagtgaactgctgctcgaaatgggaggcatcctgagaacrtttagattcgtctttagg
ggtacaggatatgatgagaaactcctgcgagaagtrgaagggctggaggcctcaggttcc
acttatatttgtaccctgtgtgatgcaacccgcttggaggcgtcccagaatttggtcttc
cactccataaccaggagccatgctgaaaacctggagcgttatgaaatatggaggtccaac
ccataccacgaatctgttgatgagctccgtgacagagtgaagggtgtttcagcaaaacct
tttattgagactgttcccwccatagatgcattgcactgtgacatcggcaatgcaacagaa
ttctacaggattttccagatggagatyggtgaactttacaagaatcctgacgtgtctaaa
gaggagaggaagaggtggcagttgacccttgacaagcacctcaggaagaagatgaacttg
aagccaatgctgaagatgagtggaaattttgccagaaagctcatgtccaaagagaccgta
gaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagccttaaaagaactaatg
gacctttatctgaagatgaagccagtgtggcgctcctcatgccctgccaaggagtgccca
gaactgctgtgccagtacagctacaattcacagcgttttgcagagctcttatctacaaag
ttcaagtacagatatgaaggcaagattacgaattatttccacaaaacacttgctcatgtt
cctgaaatcattgaaagagatgggtctattggggcctgggcaagtgaaggtaatgaatct
ggaaacaaactgtttaggaggttccgaaaaatgaatgccaggcagtccaaagtctatgag
atggaggatgtcttgaagcaccactggctgtatacctctaagtacctccagaagttcatg
aacgctcataaaacattaaaaaaacagagcttcrccattgattcagggtgtagtttaggt
gactccttgccactggtagacttggaaaacaatgattcagcagaattctaa
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