Malurus melanocephalus (red-backed fairy wren): 130578318
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Entry
130578318 CDS
T09178
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130578318 (GEN1)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130578318 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
130578318
NCBI-ProteinID:
XP_057230284
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MGVTALWQILEPVRQPVHLSSLKGKTLAVDLSLWVCEAQTVKKMVGVVTKPHLRNLFFRF
SFFTSMGIKLVFVMEGEAPRLKADTMSKRNEVRYGPPKKAGAARTGRSLFKAMLKECLEL
LDCLGVPWVQAAGEAEAMCAYLNAKGYVDGCITNDGDVFLYGAQTVYRNFAMNAKDPHLD
CYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIETLRGQNLLQRFEQ
WKEQFQYDDNPPLVVKRVIHCSECHHPGSYKEHEQSGCKFCESMRCCKPSDPKHCCPCAW
HQLERVKQANAVEDSIRKKAKSCEGFPFSEVIQEFLVNKNKLINLKECRRPNLLSFQIFA
SEKMEWPKHYACKKLLALLTRYDMIQRKSGYIDSKQLQAIRIVKTRVKNGIPCFEIEWQK
PEHYVDPEDEPVELFVATVEEESLFQAAYPDIVALYQIEKSEVLQKKQKKRKDKPEGKEL
PNAYDEVTNLLSQINLKPTYRVLSVQHSTSDTKAPPEDQTQQRSTGSKDAALAAASCVTT
VHMPASAAALADSSLPSQCTEYSGISSSSSVPADLQLGSADGKGASFSSSPACGGDDHDP
AAHLTACIKHSHPLGHKPVRNSSEYSDVTQSDTHSDSEDDLVSSDAMGQLHKWSLSERIL
QKVPISSQPLSEDVMQVESLKCFKQTKEPLNPHRNHVSSSCQLGKPVQESKNVLSKKSAS
ESRVHXYQDENKKADILAEMMQKDPYINGSTSLAFSGQTTETLHPGYEIHPASQKPADAT
GCHXKEASIETAWKASSKKSVCQNKCSSSEDSDDGHLDKMLVHEQWKRQLNPAQFKKSFT
KKRSTVVTSKRTNSDSALTMKGKDTTTNLKKAVNSFSVQVSLKPSSAEAINCSQSPEQPV
ERLGSDPTQQDKSTVLAYAWADSPLPLSERLKGRIKSN
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactgctctgtggcaaatcctcgagcctgtgagacaacctgtccacctgagt
agtctcaaaggcaaaacacttgctgttgatttaagtttatgggtttgtgaagcacagact
gttaaaaagatggttggagtagttaccaagccacatctcagaaacctattttttcggttc
tctttcttcacatcaatgggaattaaactagtgtttgtcatggaaggagaggcccccagg
ttgaaagcagacaccatgagcaagaggaatgaagtgcgctatggtcctccaaagaaagct
ggagctgcaagaacagggagatctttatttaaagccatgttaaaagagtgccttgaactg
ctggactgtttaggtgtcccttgggttcaagcagctggagaagccgaggcaatgtgtgcc
tacctaaatgcaaaaggatatgttgatggctgcattaccaatgatggagatgttttcttg
tatggagctcaaacagtttataggaactttgccatgaatgctaaggatccacatcttgac
tgctacacaatgtcctctattaaggagaaacttggttgtgacagagagtctttgattggg
ctagcagttcttctgggctgtgattatcttccaaaaggagttccaggagttgggaaagaa
caagctttaaagttaattgagactctgcgaggtcaaaacttactgcagaggtttgagcaa
tggaaagaacaatttcagtatgatgataatccacctttggttgttaaaagagtaattcac
tgttcagagtgccatcatccagggtcttacaaggaacatgagcagagtggatgcaaattc
tgtgaaagcatgagatgctgcaaacccagtgatcccaaacactgctgcccttgtgcatgg
catcagttggagcgagtgaaacaagcaaacgcagtggaggacagtatcagaaaaaaagcc
aagagctgtgagggytttccattctccgaggttatccaagagtttcttgtaaacaagaat
aaattgatcaacctaaaggaatgtcgaaggccaaatttattgtcctttcagatatttgct
tcagagaagatggaatggcccaaacattaygcttgtaagaaacttctagcacttttgaca
cgttatgatatgatccagagaaaatctggatacattgactcaaaacaactgcaggcaata
aggattgttaagacacgtgttaaaaatggaattccttgttttgaaattgaatggcaaaaa
ccagaacattatgttgatccagaagatgagcctgtggagttgtttgtagctacagtagaa
gaagagtctttatttcaggctgcttatcctgatattgttgccctctatcaaatcgaaaag
tcagaagttcttcagaagaaacagaaaaaaaggaaagacaaaccagaaggaaaggaatta
ccaaatgcttatgatgaagttaccaatctcytgtctcaaattaatttaaagcctacatac
agagttctttctgtgcaacactccacatcagatacaaaagctcccccagaagatcagaca
cagcagagaagtactggatcaaaagatgcagcattagctgcagcttcctgtgtaacaaca
gttcatatgccagcatcagcagctgctcttgctgactcatccctgccctcacaatgcact
gagtattcagggatatcatcctcttcttctgtaccagctgatctgcaactgggcagtgct
gatgggaarggagcctccttcagctcttcaccagcctgtggaggtgatgaccatgatcca
gcagctcacttaactgcctgcataaaacactcacatccactgggtcacaaaccagtaaga
aatagctcagaatattctgatgttactcagtctgatacacattctgatagtgaagatgat
ttggtttcaagtgatgctatgggacaacttcataagtggtcattaagcgagcgaatactt
caaaaagttcccatttcatcacagcctttgtctgaagatgtaatgcaagtggagtctttg
aaatgttttaaacaaacaaaagaaccattgaatcctcatagaaatcatgtctcttcctca
tgtcagttaggtaaacctgtgcaggaaagtaaaaacgttctatcaaaaaaatctgcaagt
gaatccagagtacatayctatcaagatgagaacaaaaaagctgacatcctggctgaaatg
atgcaaaaagacccttatataaatggttcaacatctctagccttcagtgggcaaacaaca
gagacacttcatcctgggtatgaaatacatccggcatctcaaaaaccagcagatgcaact
ggctgtcacrttaaagaagcttccattgaaactgcatggaaagcttcttctaaaaagagt
gtgtgtcagaacaaatgctcttctagcgaagacagtgatgatggacacttggataaaatg
ctggttcatgagcagtggaaaagacaactgaaccctgcccagtttaaaaaatcttttaca
aagaaaaggagtactgttgttaccagcaaaaggacaaacagtgactcagcccttacaatg
aaagggaaagatacaacgaccaatttaaagaaagctgttaatagtttctcagtgcaagta
tctctgaaaccatcttctgcagaggcaattaattgttcccaaagtccagagcaaccagtt
gagagactgggttctgatcccacacagcaagacaaaagcactgttctggcttatgcatgg
gcagacagtccccttcccctgtctgaaagacttaaaggaagaatcaaaagcaattag
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