Malurus melanocephalus (red-backed fairy wren): 130578431
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Entry
130578431 CDS
T09178
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130578431 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mmea04091
]
130578431 (FREM1)
Lectins [BR:
mmea04091
]
C-Type lectins
Lecticans
130578431 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
130578431
NCBI-ProteinID:
XP_057230487
LinkDB
All DBs
Position
Unknown
AA seq
2178 aa
AA seq
DB search
MKPFEKSWSFLLLPVVLRVVCSSFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVTNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDIVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSHALEVPEYYGLSRVIDKNLLTFDYDRKINLDCSISIISSETS
LPAHGQLVTRKVQREQFRGDQPWSSFPGTKHSLGHQCRNGSCTPGLGAIHNKKMSCEEFL
RMGIQYRHLDPPSPDTDYIPVRLDLSDSRSKTVHKTEYAWLPVRIKGAVPNQIPKAAPMA
KFILEVDQFILTPITTTTIDAEDHETPKSLLVFNITRPPPQGFITHLSDHTKPVGSFTWK
DLNDMLIAYQPPNNSHTERRTYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGRLSVRGGKGFMFTVSDIQAGVV
HYHHDDSDSTKDFVVFRIFDGSHSIRHKLPINILPKDDSPPFLISNVVIDVHEGQTILIQ
GSMLHASDMDSSDDYILFNITKPSQAGEIMKKPGPNLIGYSVNSFLQRDLFNGIIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSDPQVMMVHIIPVDDQLPREAPGVTRHLVVKETEISHL
TKKHLHFIDVEEQDRELTYTITTSPFFSCTQGYSDAGKLFMVDTIPKLVKDPAALALRSF
TQHAVNYMKVAYMPPLQDIGPXPRQVQFIFSVSNQHGGTLYGICFNITILPVDNQXPEVL
TTPLRVEEGGMTPVTEGHILISDTDTKREHLFLLLQRQPQHGXVELDGIPMNGGDRLSCG
DLHTLAVRYRHDGSETLTDDIFFAATDGIHFVEFILQVKVLPVNDEPPVMQTGLVPVLHC
LEGEEVVLSSEYIYATDPDSDDMRLLFILARQPYHGVVRKAGXAVDRFSQADVVAGLVTY
KHTSGEIGLAPSVEILTLVISDGEASLDVKDCCYDGPPPPPVSRHDPFPVYDLNITVLPV
DNQPPSISTGASFVVEEGSSAALTTNHLFAIDPDTPADDLEFVLVSPPQFGYIENISPSP
GFEKSNIGISIGSFQLKHVKAMNINYVQARHMQMEPTADKFVLYVTDGLHRSAETPFFVI
ISPTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPPDPLVFGVVQAPLYGFLINGI
HGSDILHYKELINHDHHSPGLLVQDFSLELLKNGMKLXYLHDNSENLIDSFKIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKNDIEVNIGETQIISSAVLSAEDKDTPRERIYYLFERL
PENGQLQLKVGQGWVTLRTGMKCTQEELDMNLVRYVHTETVGSKKKDSFTFYLWDGYNRS
PVVDVYINIKDLEKGDIAVFMKLLRVPKGDRSYITTDVLLALDGTDKPEELLYVITSPPQ
YGQIEYVSYPDIPITSFSQMDVAXQIVCYVHKAKALACEDMFRFVISNGVRTKHGTFKIS
LEAVDQALPAVSRNMGLRLTEGTTALLTPDILQLSDPDTVKENLTFLLAQLPQYGHLYYR
GAVLLWYNFTQKDVDNRDVAYKHRGGSSQIDRFTFVATDRTNQGFIVNGRVQNEPVAFTI
QVDPLDKMAPKIIHLHCFSDVEMLKNGNYGIYITARSLRASDPNTEDDKIIFKILRGPHY
GYLENVTTGEFIKEGFSQKDLNSKTILYVINQSREVNSDNLEFQVTDANGNSAVPQRLEL
RWSRIEMLQTEYEVCENMGVVSLKITRAGHSVESAFITVKVNEISARLGKDFRVTPSKLV
QFDPGVSTKMWNIAITCDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYS
HSSGQSKHDFWGRGTLFPVSSGSSAPSRPGNVYLEGIPLPPSKGMREHEGGLQQEHSLVN
RSRTRLRVTGNGRIVRPSSVFRNETDVIFKYHGIVSLKIEDDTSSAETNKKAQPQINVMS
SSKTEIPQADKAELASEPRSRHKDFYSFQKACTPDLKGLLHYEESTQKLFQCDGMTWKFW
NSQSKEVSMKNCPSGWSYHEGSCYFLVVNHKVTWNTAARACREQYQGSLTSVTNEQHMQW
LWDFSGRIPFWIGLNDQVNPGHWEWNGGESVTYMNWRRGSYHFPVRGRNCVFVQKRGKWQ
ATDCKKVKPSSYVCSRKL
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaagctggtcttttctgctgctgcccgttgtgttaagagttgta
tgctcctcctttattagtgtgaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagagagaaggatgtctgcaaagtagaa
gttgtgactaatgagccaataacacagagggttgggaaactaactccacaggtttttgac
tgtcacttccttcctaatgaagtcaaatacacccacaacggatgtccgattttagatgaa
gacattgtcatgcttagactgtayagatttacagaaacggaaacatttgtggaaacattc
accctacatgtgcagttacttgagccagactgcaacatcataaaaatgcgctcccatgct
ttggaggtccctgaatactatggtctgtccagggtgattgacaagaacctcctcaccttt
gattatgacaggaagataaacctggattgcagcatttccataatctcttcggaaaccagt
ctgcctgctcacggccagcttgtcaccaggaaagtgcagcgagagcagtttcgtggagat
cagccatggagctccttccctggcactaagcacagcctgggccaccagtgcagaaacggg
agctgtacaccaggactaggagccatccacaacaagaaaatgagctgtgaagaatttctg
aggatggggattcagtatcgacaccttgacccaccctcacctgacactgactatattcct
gtgaggttggatctctcagacagcagaagcaaaactgtgcacaagacggagtatgcatgg
ctccctgttcggattaaaggtgctgttcccaaccaaatacccaaagctgccccaatggca
aaattcatcctggaagtggatcaatttattttaacccctattacaaccacaaccattgat
gccgaagaccacgaaactcccaagtccctgcttgtattcaacattaccaggccacctcca
cagggctttatcactcacctgtctgaccacacaaaacctgttggctccttcacgtggaag
gatctcaatgacatgctcattgcttatcagcctccaaacaacagccacacagagagaagg
acctatgaggtggaatttgaggttcatgatttctactttgaaaggagcttaccaatcact
gtgcatctttctatcagaacaaccgatacaaatgcccctcgggtttcatggaatacaggg
ctcaacctcctagaggggcaatcccgacccatcacatggcaacacttccaaattgtagac
aatgatgacatccaaaatgttcgcttggtcacagttgacggcttacagcatgggcggctg
tcagtgagaggaggaaaaggattcatgttcacagtctctgacattcaggctggagttgtt
cactaccaccatgatgacagtgattctactaaggacttcgtggtatttaggatttttgat
ggctcccacagtattcgccataagcttccaataaacatcctccctaaagatgacagccct
ccatttctgatcagcaacgtggtcattgatgttcacgagggacagacaatcctcattcag
ggctccatgcttcacgcttctgacatggattccagtgatgattacatattattcaacatc
accaagccatcacaggctggagaaatcatgaagaaaccaggaccaaacttgataggatat
tctgtcaacagttttcttcagagggatctatttaatggaataatttattatcaccatttg
ggaggagaagtgtttgaagattcccttgagtttgtgctatgtgatagccatgaccctcca
aatctctcagatccacaggtgatgatggtgcacattatccctgtggatgaccagctgccc
agagaagctccgggagtgacccgtcacctcgttgtgaaggagacagagatttctcaccta
actaagaaacatcttcacttcatagatgtggaagagcaagacagggagctcacctacacc
ataaccacttccccatttttctcttgcactcagggctactcagatgctgggaagctgttt
atggtggacaccatacccaaattggtcaaggatcctgctgctcttgcgctgcggtcattt
actcagcatgctgtgaactatatgaaagttgcttacatgccaccactgcaggacattgga
cctgamcctcggcaagtccagtttattttttccgtcagcaaccagcatggaggcactttg
taygggatctgcttcaatattacaattcttcctgtggacaatcaarctccagaggtttta
acaacccctttgagggtggaagagggtggcatgacccctgtgacagaaggacacattctc
atctctgacacagatacgaaacgagagcatctcttcctgctcctgcagaggcagccgcag
catgggstggtggagctggacggcattcccatgaatggaggcgacaggctttcctgtggg
gacctgcacaccctggcagtcagataccgtcatgatggctctgagactctcactgatgat
attttctttgcagccacagatggcatccactttgtagagttcatcctgcaggtcaaggtg
ctgcctgtgaatgatgagccacctgttatgcaaacaggccttgttcctgtgctccactgc
ctggagggtgaagaagtagtcctctcctcagagtacatttatgccactgacccggacagc
gatgacatgagattgctgttcattctggcccgccaaccctaccacggggtagtgaggaaa
gctggcaytgctgtggatcgtttctcccaagccgatgtcgtcgctggcttagtcacatac
aagcacaccagtggggagattggcctggctccttccgttgagatcctaaccttagttatc
tctgatggtgaggccagcctggatgtgaaagactgctgttatgatggacctcctcctcct
ccagtttcacggcatgatccatttcctgtctatgaccttaacatcactgtgcttccagtg
gacaaccaacctccatcaatttcaacyggtgcaagctttgtggtggaggagggctcctca
gcagcccttaccaccaaccacttgtttgccattgaccctgacacccctgcagatgactta
gagtttgtgctggtttctcctccccagtttggttatattgaaaatatatcgccttctcct
gggtttgagaagagcaacattggaataagtataggttcattccagctgaagcacgtgaaa
gccatgaatataaactatgtccaagccaggcacatgcaaatggagccaacagcagacaag
tttgtactttatgtcactgatggcttgcatcgctcggcagagactccattttttgtgata
atcagcccaaccaatgatgaagttccagaatttatagccaggaatattactgttcaagaa
ggggagatgaaagarctggatctgtcggttatcaatgcagttgatttggatgtgcctcca
gaccckctggtatttggggttgtgcaggcacccttgtatgggttccttattaatggtata
catggcagtgatattctacactataaggagttaattaatcacgatcaccacagccctggg
ttgcttgtccaggacttctccctggagctactgaagaatggaatgaagctgatktacctg
catgacaactctgaaaacctcattgacagctttaaaattcagctatcagatggaaaacat
aaagtcctcagaaccatttcagttaaggtcattccagttaatgatgagaaaccagtgctg
agcaagaagaatgatatagaggtgaacataggtgaaacacaaataatttctagcgctgtt
ctgtcagcagaagataaagatacccccagggagagaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggacaaggctgggtgactctccgaactgga
atgaagtgcactcaggaagaactggatatgaaccttgtgagataygtccatacagaaact
gtggggtccaagaaaaaagacagcttcaccttttacctctgggatgggtacaacagatcc
ccagttgtggacgtttacataaatatcaaggacttggaaaagggagacattgcagttttt
atgaaactccttagggtgccaaaaggagatcgcagctacattacaaccgatgtcctcctt
gcactggacggtactgacaagccagaggagctcctttatgtgataacctctccaccccag
tatggacaaatagagtatgtcagctatcctgacatccccatcacgagcttcagccaaatg
gatgtagcacracagattgtctgctatgttcacaaagccaaggcacttgcttgtgaagat
atgttcagattcgtcatcagcaatggagtgaggactaagcatgggacattcaagatctcc
ttggaggcagttgaccaggctttgcccgcagtatccaggaacatggggttaagattaaca
gaaggcactacagcacttcttactcctgacatcctgcagctttcagacccagatactgtg
aaagaaaaccttaccttcctcctggctcagctcccccagtatggccatctctattatcgt
ggggctgtgctactgtggtacaatttcacacagaaagatgtggacaacagggatgttgca
tacaagcaccgaggtgggagttcccagattgacagatttacatttgttgccacagatagg
actaatcaaggcttcatcgtgaatgggagggtgcagaacgagccagtggcattcaccatt
caggtggatcctttggacaaaatggcaccaaaaattatccatctccattgcttttctgat
gtggaaatgttgaagaatggcaattatgggatctatattactgccaggtccctgagggca
tctgaccccaatacagaagatgacaaaataatttttaagattttgcgaggtcctcattat
ggctacctggaaaatgtaacaacaggggaattcattaaggaaggatttagccaaaaggat
ttaaacagcaaaaccatactttatgtcatcaaccaatcacgagaagtgaattcagacaac
ttggagtttcaagtgacagatgccaatggaaactctgcagtgccccaaaggctggagcta
cggtggtctcggatcgaaatgttacagactgaatatgaggtgtgtgaaaacatgggagtg
gtgtctctgaaaatcaccagggcaggacactcagtggaatctgcctttataacagtgaag
gtcaatgaaatatctgctaggctgggaaaggactttagagtgactccctccaagcttgtt
cagtttgatccaggagtgtcaaccaagatgtggaatatagcaattacctgtgatggatta
gaggaagatgatgaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggc
acacggacaaaagctgtagtgaaaattttggactcaaaaggaggtcaatgcagctattcc
cattcttctggccaaagcaagcatgacttttgggggagaggcacgctctttccagtttcc
tcagggtcctcagcaccttccagacctggcaatgtttacttggaagggatcccactgcct
ccttccaaagggatgagagagcatgaagggggcctgcagcaggagcacagcttggtgaat
cggtcaaggaccaggctgagagtaactggaaatggcagaatagttcgtccttcatctgta
tttagaaatgaaacagatgtgattttcaaatatcacgggattgtatcactcaaaatagag
gatgacacctcctcagctgaaaccaacaagaaggcacaaccacagataaatgtcatgtcc
tctagcaagacagaaattccacaggctgataaagcagaacttgcatctgaaccaagatcg
agacataaggacttttactcttttcaaaaggcctgcacacctgatttaaagggtctcttg
cattatgaagaaagcactcaaaagctgtttcagtgtgatgggatgacatggaaattctgg
aattcccaaagcaaggaggtatccatgaagaactgtccctctggatggagttatcatgag
ggtagttgctacttcctggtagtgaatcataaggtcacctggaacactgctgctcgggct
tgcagagaacagtaccaggggagtctaacaagtgtgactaatgaacaacacatgcaatgg
ctgtgggacttcagtgggaggattcccttttggataggtttgaatgaccaagtcaatcct
ggacattgggagtggaatggaggagaatctgtaacctacatgaactggagaagagggtcc
taccattttccagtgagaggaagaaattgtgtatttgtgcagaagcgaggaaaatggcaa
gcaactgactgcaaaaaggtcaaaccaagcagctatgtctgttcaagaaagttgtaa
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integrated database retrieval system
