Malurus melanocephalus (red-backed fairy wren): 130578963
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Entry
130578963 CDS
T09178
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130578963 (PRDM1)
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130578963 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
CapR
Motif
Other DBs
NCBI-GeneID:
130578963
NCBI-ProteinID:
XP_057231396
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MRIKGCFLFFQAATQGSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPSSRELTMMNLPQTHVNPKQHSADKDELYQKSI
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHLSPAFLPSYNHHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLTPTTLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSVTGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILAMLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDMSIMKLPHGHPLPLLPVKVKQETIEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccaggctgctacacagggtagctcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaggctgattttgaagagaagtgcacatatattgtaaat
gatcacccgctggatcccagtgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatatgcatctaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagt
gatacagttcccaagaatgcgaacagaaaatacttttggcggatctattcaagtggtgaa
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaat
cctggctactctgttcaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctacaccatcaagcccatccctgccaaccaagagctgcttgtgtggtattgccgagac
tttgcagagaggctgcactatccctcctccagagagctgacaatgatgaacctcccacaa
acccacgttaatccaaagcagcacagtgctgataaagatgagctttatcagaaaagcatc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaaccctccaaaagga
aaagacttctttcagaccaacatttcgccagttactccagaaaaagacttggatgattta
cgtaagaactatagcccggagaggtgtttcttccctcgagttgtctacccgatccgacct
cacattccagaagactatctgaaagcttccttagcgtacggcatggacagacccagctac
attacccactcacccatccaggcctctactacaccgagtccttccgggaggagcagccca
gaccaaagtttaaaaagttcaagccctcacagtagtccaggggtcacggtttcacctctg
gcacctacttcccaagagcacagagagccatactcttacttgaatggatcgtatggctca
gaaggattggggtcttatcctggatatgcaccccctggccacctctcacctgcctttcta
ccatcctacaaccaccattaccccaaatttctgttacctccgttcaatatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcaatctgttcccamggatg
tatcctctttacggcaacctgctcagcgggggtagcctttcccaccacatgctgaccccc
accacgctgcccagctccttgcccagcgaaggaggccgtcgattgctgcagcctgatcat
cccagagacttcctcataccagcacccaacagtgccttctctgtcacgggcgctgctgcc
agcatgaaggacaagccatgcagccctaccagcgggtcccccaccgctggtacagcagcc
agttcggaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctccca
tatccactgaagaagcagaatgggaagatcaagtacgaatgcaatgtttgctccaagacc
tttggccagctctccaacctgaaggtgcacctccgagtacacagcggagagagaccattt
aaatgccagacttgcaataagggcttcacgcagctggctcacctccagaagcactatctg
gtacacacgggagaaaaaccccacgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctc
tgcccagccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgc
gaacgcccccacaaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccacctgaagggcaattgtcccgtggcccctgcctccgggctctccatggaggacctg
aaccgaatcaatgaggagatcgagaagtttgacatcagtgacaatgccgacaagttggaa
gaagtggaggacaatatcgacttaacatcgatcgtggagaaggatatactggccatgctc
aggagggaaatggaaggagctaatctgaaagtctctctrcagaggaacctgggaaatggg
cttatctcctcaggatgcaacctttacgagtcgtcagatatgtcaattatgaagttgcct
cacggtcacccactacctctgttacctgtaaaggtcaagcaagaaacaattgaaccaatg
gacccttaa
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