Malurus melanocephalus (red-backed fairy wren): 130579068
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Entry
130579068 CDS
T09178
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmea03036
]
130579068 (CHD5)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130579068 (CHD5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
130579068
NCBI-ProteinID:
XP_057231584
LinkDB
All DBs
Position
Unknown
AA seq
1947 aa
AA seq
DB search
MMSLVSCACAVRPRELSLLSPEEDDGVLEGLDEFFAEEQVVVQKKKKSKKLKDGKAAKIK
RRKKEGSNDEMSENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDXEDDDDD
GGLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMM
TVLGAKWREFSANNPFKGSSAAAAAAAIAAAVETVTIAPTLPASPQPSAVPAVIRKAKTK
EGKGPGVRKKIKGSKDAKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSAS
INSSSMRSECSAGLGKKGKKRKKKKRIEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAY
HLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDGG
ELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAALLP
AADTELPLPPPKALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMD
EPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIH
YLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEE
KLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGL
GKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSV
IRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEA
HRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA
DISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFE
ALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLL
QKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAP
GAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFV
TRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMV
SQGQRIAMPDAVTPFSDTLSSKGGAATPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISK
LLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLL
RHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSVGSEDEDEDFE
ERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQ
DAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRI
GVMSLVRKKVQEFEHVNGKYSTPDLVLEGPESKRCSEVVSSDPNTPVPASPAHTHTGPGA
LADKIEAQLGFHEEKDPVEQKPRKVADGQVSASAEVESEEHPESCDSKERLREEKQEDCE
KAEPSSEPLVKDEGIREQEKPXEKAELSSSPGKGEDKEVKPEDGKEEEKEHSDAQQNGDK
EEEEEGKRDDRNVNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDIWHRRHDYWLLA
GIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQL
RRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEE
LLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPSAQGSFGSPQIFNNNF
GPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcctggtgtcttgtgcctgtgcagtccgtccacgtgagctgtcccttttgtcc
ccagaagaagatgatggggtgctggaaggactggatgagttttttgcagaagagcaagtc
gtggtacagaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaaa
aggagaaagaaggaggggagcaatgatgaaatgtcagaaaatgaagaggagattgaggag
aaatcagaaagcgaagggagtgactattctcccaacaaaaagaaaaagaaaaaactraaa
gacaagaaggagaaaaagccaaaacggaagaagaaggatgamgaggaygatgaygatgat
ggaggtctaaaggagcccaagagctcagctcagctgatggaggaatggggcctcgatgac
gtagattacgttttctcagaagaggattatcatactctgacgaattacaaggctttcagt
cagttcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatgatg
acagtgctcggtgccaagtggcgagagttcagcgccaacaaccccttcaagggcagctcg
gcggcggcggctgcggcagccatcgctgcagctgtggagactgtcaccatcgccccgaca
ctccctgccagcccccagccctctgctgtgcctgctgtcatcaggaaggccaagaccaag
gaggggaagggtccgggtgtgaggaagaaaatcaagggctccaaagacgcgaagaaaaag
gggaaggggaaaaagatggcaggcttgaaattccggtttggaggaatccccagcaaaagg
aaaaagggytcctctagtgaagaggaggaaagggaagagtctgactttgacagcgccagc
atcaacagctcctccatgcgctctgagtgctcvgctggcctggggaagaaggggaagaag
aggaaaaagaaaaagaggatcgaagacggggacggctacgagacggaccaccaggactac
tgcgaggtgtgccagcagggcggggagatcatcctgtgtgacacgtgtccccgcgcctac
cacctggtgtgcctggaccccgagctggagaaggcccccgagggcaagtggagctgcccc
cactgcgagaaggagggcatccagtgggagccaaaggaggaggaggaggaggaagaggat
ggtggtgaggaggaggaggatgaccacatggagttctgccgggtgtgtaaggatggaggg
gagctgctgtgctgtgacacctgcccgtcctcctaccacctgcactgcctgaacccgccg
ctgcccgagataccaaacggtgaatggctctgcccacgctgcacatgccctcccttgaag
ggcaaagtccagcgcatcctgcactgggcctggaaggagcctccggctgccctgctgccc
gccgcggacacggagctgcctctgcccccaccaaaggcgctggaggggatcccggagcgc
gagttctttgtgaagtgggcaggcctctcctactggcactgctcctgggtcaaggagctg
cagctggagctctaccacaccgtgatgtaccgcaactaccaacgcaagaacgacatggac
gagccaccagccttcgactacggctctggggacgaggacagccagagggagaagcgcaag
aacaaagacccccagtatgccaagatggaggagcggttctaccgctacggcatcaagccc
gagtggatgatgatccaccgcatcctgaaccacagctttgataaaaagggagacatccat
tacctgatcaagtggaaggacctgccctacgaccagtgcacctgggagatcgatgacatc
gacatcccctactatgagaacctcaaactcctctactggaaccacagggagctgatgctg
ggggaggacacrcgccctctgaagaagctgaacaagaaagggaaaaagctgaaagaggag
aagctggaaaagcctccagaaacacctctcgtggatcctacggtgaagtttgacaagcag
ccgtggtacatcgatgccacggggggcacgctgcacccttaccagctggaaggrctcaac
tggctgaggttctcctgggctcaagggacagacaccatcctggctgatgagatggggctg
ggcaagacggtgcagaccattgtgttcctgtattccctgtacaaggagggccactcgaaa
gggccgtacctggtcagtgcccctctctccaccatcatcaactgggagcgggagtttgag
atgtgggcacccgacttctacgtggtgacctacacgggggacaaggagagccggtcrgtc
atccgggaaaatgagttttcctttgaagacaacgccatccgcagtgggaagaaggtgttc
cggatgaagaaagaagcccagatcaagttccacgtcctgctcacgtcctatgagctgatc
accattgaccaggcagtgctgggctccatagaatgggcctgtctggtggtggatgaagca
cacaggctgaagaacaaccartccaagttctttcgggtactgaatagctacaagatcgat
tacaagctgctcctcacagggactccgctccagaacaacttggaggagctcttccatctg
ctcaatttcctgactccagagaggtttaacaacctggaggggttcctggaggagtttgca
gacatctccaaggaggaccagatcaaaaagctccatgacttgctgggtccccacatgctg
cggcggctcaaggctgatgtgttcaagaacatgccggccaagacggagctgatcgtgcgg
gtggagctgagccagatgcagaagaaatactacaaattcatcctgaccaggaacttcgag
gccctgaattcgaaaggtggtgggaaccaggtgtccctgctcaacatcatgatggacctg
aagaagtgctgcaatcacccgtacctgttccctgtggcagctgtggaggccccagtgctg
cccaatggatcttacgatgggaattctttggtcaaatcttctgggaagctgatgctgctc
caaaagatgctgaagaagttacgggatgggggtcacagagttctgatcttctcgcagatg
accaagatgctggacttgctggaggatttcctggagtaygaaggctacaagtacgagcgg
atcgacgggggcatcactggtggcctgcgccaggaggccatcgacaggttcaatgctcct
ggggctcagcagttctgcttcctcctgtccacccgcgccggtggtctgggcataaacctc
gctacggccgacactgtcattatttatgattctgactggaatccccacaatgacatccag
gcgttcagcagagcccaccgcatcgggcagaacaagaaggtgatgatttatcgcttcgtg
accagggcctctgtggaggagcgcatcacccaggtggccaaaaggaaaatgatgctcacc
cacctggtggtccgcccggggctcggctccaaatcaggctccatgaccaagcaagagctg
gacgacatcctcaagtttgggacagaagaactgttcaaggatgatgtggagggcatggtg
tctcagggacagcggattgccatgccggatgctgtcacccctttctcggacacactctca
agcaaagggggtgcagcgactcctggcatgaaaaaaaagcatggtggcaccccaccaggt
gacaataaggatgtggatgacagcagtgtgatccactacgatgacgccgccatctcgaag
cttttggaccgaaaccaggacgcaactgatgacacggagctgcagaacatgaatgagtat
ctcagctcctttaaagtggctcagtatgtcgtgagagaagaggacggtgtggaggaggtg
gaacgtgagatcatcaagcaagaggagaacgtggaccctgactactgggagaagctgctg
cggcaccactatgagcagcagcaggaagatctggccaggaacctggggaaagggaagaga
atccgcaagcaggtcaactacaatgacacctcacaggaggaccaagagtggcaggatgag
ctctctgacaaccagtcagaatattctgttggctctgaggatgaggatgaagactttgag
gagaggccagaaggccagagtggcagaaggcaatcccggagacagctgaagactgacaga
gacaaacctcttcctcctttgctggccagagttggggggagcatcgaggttctgggcttc
aacgcccggcagcgcaaggcgttcctgaacgccatcatgcgctggggaatgccrccccag
gatgccttcaactcccactggctggtgcgggatctgcgggggaagagtgagaaggagttc
agggcatatgtctctctgttcatgagacacctgtgtgagcctggggcagacggcgctgag
acctttgcggatggcgttccccgcgaaggactgtcacgccagcacgtgctgacacgcatc
ggggtcatgtcactagtaaggaagaaggtccaggagtttgagcacgtcaatggcaagtac
agcaccccagacctggttcttgagggtccagagagcaagaggtgcagcgaggttgtgtct
tctgatcccaacacgccygtcccagccagcccagcacacacacacacgggaccaggggct
cttgcagacaaaatagaagcacaactggggttccatgaggaaaaggacccagtggagcag
aagcccagaaaggtggctgatggccaggtgtctgcaagtgctgaggtggagagtgaagag
cacccagaaagctgtgacagcaaggagaggctgagggaagagaagcaagaggattgtgaa
aaggctgagccttcttctgagcccctggtgaaagacgaggggattcgagagcaggagaag
ccttyggagaaggcggagttgagcagcagcccagggaagggggaggataaagaagtcaaa
ccagaggatggcaaagaggaggaaaaggagcacagtgatgcccagcaaaacggtgacaaa
gaggaagaggaggaaggaaagagggatgacagaaatgtgaatttcagattcatgttcaac
attgctgacggtggcttcacagagctgcacacgctgtggcagaacgaggagagggctgcc
atgtcctctggcaagatctacgacatctggcaccgccgacacgactactggctgttggca
ggaattgtcactcatggctatgcccgctggcaggacatccagaatgacccgcgctacgtg
atcctgaacgagcctttcaagtcggagatacacaaggggaactacctcgagatgaagaac
aagttccttgcccggcggttcaagttgctggagcaggctctggtgatcgaggagcagctg
cggagggcggcgtacctcaacatgacccaagaccccagtcacccggccatggcgctgaac
gcgcggctggcggaggtggagtgccttgcygagagccaccagcacctctccaaagagtcc
ctggctgggaacaagcctgccaacgctgtcctgcacaaggtgctgaaccaactggaggag
ctgctgagtgacatgaaggctgatgtgacacgcttgccctccatgctgtcccgcatcccg
cccgtggccgcacgcctgcagatgtcggagcggagcatcctcagccgcctggccacccgt
ggaggggatccatctgcccagggctccttcggctccccccagatcttcaacaacaacttt
ggcccaaatttccgtggtcctgggccaggtgggattgtcaactacagccagatgcctctg
ggaccctatgtgactgatatttag
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integrated database retrieval system
