Malurus melanocephalus (red-backed fairy wren): 130579225
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Entry
130579225 CDS
T09178
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130579225 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmea03021
]
130579225 (SMARCA2)
03036 Chromosome and associated proteins [BR:
mmea03036
]
130579225 (SMARCA2)
Transcription machinery [BR:
mmea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130579225 (SMARCA2)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130579225 (SMARCA2)
Chromatin remodeling factors
BAF complex
130579225 (SMARCA2)
PBAF complex
130579225 (SMARCA2)
GBAF(ncBAF) complex
130579225 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
130579225
NCBI-ProteinID:
XP_057231844
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYQQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAAAGP
GPAPGMPGHTTAITPKTWTEGQAPDLXVSNAQQKLPAPAPSGRPSPAPPAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSRLESDEKIVLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacggaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctggggcctagcccaggaccagggccatctcctggctccgtt
cacagcatgatggggccaagtcctgggccgcccagtgtcccacatccaatgccgacaatg
gggcctacagattatcaacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctcct
catcctggaatgggcccacctcagagtccaatggaccagcatagccaaggttacatgtct
ccacacccatctccactgggtgcaccagagcatgtgtccagtccaatgtctggaggaggt
cccacaccccctcagatgactcccagtcagccaggacccattataccaggagaccctcaa
gttatgaatcarcctaacagaggaccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctagcctacaaaatgctggctagaggtcagcccttaccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcctggcattcaacagcagcagccccccagt
gcctttaacagacagtctggtattgggttacatgcaatgagtggtgctgcagctggacca
ggacctgctccagggatgcctggacatacaactgccattacccctaaaacttggackgaa
ggccaagccccagatttgarcgtctctaatgcacaacaaaagcttccagcaccagctcct
agtgggaggccttctcctgctccccctgctgcccagcctgctgccaccatgcctgggccc
tccgtaccacagcctccacctggacaaccttcacccattgtccagctgcagcaaaagcag
aaccgcatcagccctatccagaagccacaaggattggatcctgttgaaatactccaagaa
cgtgaatatagacttcaagctcgaattgctcacagaatccaggaactggagaacttgcct
ggttcactgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttagatta
ctgaatttccaacgccagctaagacaagaggtagtggcctgcatgcgtcgtgacacaaca
ctggagacagcactgaactccaaagcctacaaacgaagcaagcgccagactttgagagag
gctcgtatgacagaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtagg
caaaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagttgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgagaaga
ctaatggctgaagatgaagaaggctatcgtaagctgattgatcaaaagaaagacagacgc
ctggcatacctgttacagcagactgatgagtatgtggctaacttgactaacctagtatgg
gaacataaacaggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggtcccgatggagagcccatagat
gagagtagtcagatgagtgaccttccagtcaaagtgacccacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggctctgaatatgaggaa
gaggatgaggaagaagaatcaagcagactagaatcagatgagaagatagtcctggatccg
aacagtgaggaggtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatacagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcacagaaagagtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggaatggatggtttctctctataataacaacctgaat
ggaattctggcagatgaaatgggactaggaaagacaatacagactattgctctcatcact
tacctgatggagcacaaaaggctcaatggcccgtatctcatcattgttcccttgtcgact
ttatccaattggacatatgaatttgacaaatgggctccttctgtggtgaagatctcttac
aagggtacacctgcaatgcgccgttcacttgttccccagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcga
tggaagtacatgatagtagatgagggtcatcgaatgaaraaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcgtcgaattctgctgactggaactcctttg
cagaacaagttgcctgaactttgggctctgctcaatttccttcttccaaccattttcaag
agctgcagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactatattgatcatccgtcgtctccataaagtgcttcggccc
ttcttgctgagaagattgaagaaagaagttgagtctcaactgcctgaaaaggtggaatat
gtgatcaaatgtgacatgtcagctcttcagaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggctctgaaaaagacaagaagggaaaaggtggggcaaaaact
ctcatgaacacgatcatgcaattgagaaagatatgcaatcacccatatatgtttcagcac
attgaggagtccttcgctgaacatttgggctactccaatggtgtaattaatggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctggatcgcaatactttatcttcttgctg
agtaccagggctggagggctaggcttaaatctccaggctgctgacacagttataatcttc
gatagtgactggaatcctcatcaggacttgcaggcccaggacagagctcaccgaattggt
cagcagaatgaagttagagtcctgcgactgtgcactgtcaacagtgtggaagagaagata
cttgctgctgcaaagtataagctgaatgtagatcagaaggttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagcattcctacaagctatattggagcatgaa
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgcc
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaaacgtaagccccgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatattt
ggaagaggatcccgtcaacgcagggatgtggactacagtgacgctcttacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagagaaagagacgaagaaatgtggataaagattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcacccaatccacccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctgagtgaagtcttcattcagctcccatccagaaaagaactaccagagtattatgaattg
attaggaaaccagttgacttcaaaaagataaaggagagaattcgcaaccataagtatcgg
agtcttggggatttagagaaagacgtcatgctgctgtgtcacaatgctcagacattcaac
ttggagggatctcagatctatgaagattccattgttcttcagtctgtcttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggacgaaagcaatgatgatgaagaagaa
gatgaagaagaagaatctgaatcagagtcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagccgagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
