Malurus melanocephalus (red-backed fairy wren): 130579542
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Entry
130579542 CDS
T09178
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130579542 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmea03021
]
130579542 (SF3B3)
03041 Spliceosome [BR:
mmea03041
]
130579542 (SF3B3)
03036 Chromosome and associated proteins [BR:
mmea03036
]
130579542 (SF3B3)
Transcription machinery [BR:
mmea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130579542 (SF3B3)
Spliceosome [BR:
mmea03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
130579542 (SF3B3)
Complex B
130579542 (SF3B3)
Complex C
U2 SnRNP specific factors
130579542 (SF3B3)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
130579542 (SF3B3)
TFTC complex
130579542 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
130579542
NCBI-ProteinID:
XP_057232391
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgacattgcagcgtgccacaggcattagctttgctatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcctggagtta
ctccgccctgatcccaacactgggaaggttcacactttgctaaccgtggaagtgtttgga
gtcatccgctccctcatggcctttaggctgacagggggcaccaaagaytacatcgtggtg
ggcagcgattcggggcgcattgtcatcctggagtaccagccctccaagaacgtgtttgag
aagatccatcaggaaacctttggcaagagtggatgtcgcagaatcgttccaggccagtac
ttggctgtggatccaaagggccgtgctgtcatgatcagtgccattgaaaagcagaagctg
gtgtatatcctgaacagagatgctgctgctcgactcaccatttcctccccactggaagcc
cacaaggccaataccttggtctatcatgtggtgggagtcgatgtgggatttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggagaagct
gcagccaacacacaacagacattgacgttttatgaactggacttgggtttgaatcacgtt
gtcaggaaatacagtgaacccctggaagagcatggcaacttcctcataacagttcccggt
ggttctgatggccccagtggagtgctgatctgttctgagaactatattacttacaaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagagaggtatgatttttgtctgctctgctacrcataagaccaagtccatgttcttc
ttcctggcccagacagaacagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaaatactttgayactgttcctgttgctgctgccatgtgc
gtgctgaaaacggggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagcwcacctgggggatgatgatgaggagccagagttttcttctgccatgcctcttgag
gaaggagataccttcttttttcagccacgacctctgaagaacctggtgctggtggacgag
ttggacagtttgtctcctattctgtgttgccagatagcagatttggccaatgaagacaca
ccccaattatatgtggcatgtggtcgggggcctaggtcatctctgagggttttgagacat
ggacttgaggtatccgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcctacattattgtgtccttcgtaaat
gccacactggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacacccacattgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcatatccgagcagataaaagagtwaatgagtggaagacaccaggg
aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga
ggagaattagtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga
aaggagatgtcggctgatgttgtttgcatgagtttggccaatgttccccctggggagcag
cgttcccggttccttgctgttgggctggtggacaacactgtcagaattatttcacttgat
ccttcggattgcttacaacccctgagcatgcaggcactgcctgcccagcccgagtcgctk
tgcatcgtggagatgggtggcacagagaagcaggacgagctgggggagaggggctccatt
ggctttctgtacctgaacattggactgcagaacggtgtgctgctgcgaactgtcttggat
cctgtcactggcgacctttctgacaccaggaccagataccttggctcacggcctgtcaaa
ctcttccgtgtccgaatgcaaggccaagaggcggtgctggccatgtcaagcagatcrtgg
ctcagttattcctatcagtcacgtttccacttgactcccctgtcttatgagacactggag
tttgcgtctggttttgcttctgagcagtgccctgagggcattgtggccatctccacaaac
acattgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttcccg
ttgcagtacacaccccgaaaatttgtcattcaccctgagagcaacaacctgatcatcatt
gagacagaccacaatgcttacactgaggccaccaaggcacagaggaagcaacaaatggct
gaggaaatggtggaggctgcgggtgaggatgagagggagctggctgcagagatggctgca
gcctttctgaacgagaatcttcccgagtccatctttggtgctcccaaggcagggaatggt
cagtgggcctctgttatcagggtgatgaaccccatccagggaaatacattagatctggtt
cagctggaacagaatgaagctgctttcagcgtggccgtgtgccgcttctccaacactggt
gacgagtggtacgtgctggtgggmgtcgccaaggacctgattctgaacccacgctcagtt
gctgggggctttgtctacacatacaaactggtgaacagtggtgagaagctggagtttctr
cacaagacccctgtggaggaggtccctgcagccattgctccattccaaggccgagtctta
attggagttggaaagctcctgcgtgtrtatgacctgggcaagaagaaactgcttcggaaa
tgtgagaataagcacatcgctaactacatctgtgggatccaaaccattgggcacagagtg
attgtttcagatgttcaggagagtttcatctgggtgcgttacaaaaggaatgagaaccag
ctcattatyttcgctgatgacacttacccccggtgggtcactacagcaacgctcctggat
tacgacactgtggctggagcagacaagtttggtaacatctgtgtggtgagattgcctccc
aacaccaatgatgaggtagatgaggatcccacrggcaacaaagctctctgggacaggggc
ctgcttaatggagcatcgcagaaggctgaagtgattatgaattaccacgtgggagagacg
gtgctttccttgcagaagaccacactgattccaggaggctctgaatctcttgtctacacc
accttatcaggggggataggaatcttggtcccctttacttcccatgaggatcacgacttc
ttccagcacgtggaaatgcacttacggtctgagcaccctcctctctgtggacgagaccat
ctcagtttccgctcctactacttcccagtgaagaatgtgattgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggctgaggagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacacgctacgctttctga
DBGET
integrated database retrieval system
