Malurus melanocephalus (red-backed fairy wren): 130579543
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Entry
130579543 CDS
T09178
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130579543 (CTCF)
03036 Chromosome and associated proteins [BR:
mmea03036
]
130579543 (CTCF)
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130579543 (CTCF)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130579543 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
130579543
NCBI-ProteinID:
XP_057232392
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MKRTNQSRQKCRSVKNINQEGEMEGEAVDAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGSEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAAAQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
VEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgtcaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagttgacgctattgtggaggaatcagaaactttcattaag
ggaaaagagaggaaaacctatcaaagacgccgtgaaggtggacaagaggatgatgcttgt
catataccaccaaaccaagcagatggaagtgaagtggtccaggatgtcagcagtggggtg
cagatggtgatgatggatcagctggatccaactcttctgcagatgaagaccgaagtaatg
gaaggtgcagtgcctcaagaaactgaggctactgtggatgacacacagatcataacactt
caggttgttaatatggaagagcagcctataaacctyggtgagcttcagctggtccaagta
cctgtaccagtgactgtacctgttgccaccacgtctgtggaagaacttcagggagcttat
gaaaatgaggtttccaaaggaggcctgcaggagggggagcccatgatctgtcacaccctt
cctttaccagaaggcttccaagtagtgaaagtgggtgcaaatggtgaggtggagacactg
gaacaaggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggc
aaagatgtggatgtctctgtgtatgactttgaagaggagcagcaagagggtttgttgtct
gaggttaatgcagagaaggtggtgggcaatatgaagccaccaaaaccaacaaaaattaaa
aagaaaggtgtaaagaagacattccagtgtgaactgtgcagttacacttgtccgcgtcgt
tccaacttggaccgccacatgaaaagtcacaccgatgaaagaccacacaagtgccatctc
tgtggcagggctttcmggacagtcacattgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacacacccacgagaaaccattcaaatgttccatgtgtgactat
gcgagtgtggaggttagcaaattgaaacgccacatccgttcgcacaccggagagcgcccg
ttccagtgcagcctgtgcagctatgccagcagggacacctacaaactgaagaggcacatg
aggacccactccggagagaagccatatgaatgttacatctgccatgctcgcttcactcag
agcggtaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaattccac
tgtcctcactgtgatactgttatagcgagaaagagtgacctgggtgtccacttgaggaag
cagcattcctacattgagcagggcaagaagtgtcgctactgtgacgctgtgttccatgag
aggtatgccctcatccagcatcaaaagtcccacaagaacgagaagcgcttcaagtgtgac
cagtgtgattatgcctgcagacaggagcggcacatggtcatgcacaaacggacccatact
ggagaaaagccttatgcctgtagccattgtgataaaaccttccgccagaagcagcttctt
gacatgcacttcaagagataccatgatcccaactttgtccctgctgcctttgtctgctcc
aagtgtggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggggaaggagagaatggaggagagacaaagaaaggcaaacgtggacga
aagagaaagatgcgttctaagaaagaagattcttctgatagtgaggaaaatgctgaacca
gatttggatgataatgaagatgaggaggagacagctgtagaaatagaggctgaaccagaa
gttgagcaagaggctcctgcaccacctcccagtaagaaaagaagaggaagaccaccaggc
aaagctgccgcccaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaatattatagttgaagtgaagaaggaacctgatgcagaaaca
gtagaggaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcacc
cctgagatgattctcagcatgatggaccggtga
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