Malurus melanocephalus (red-backed fairy wren): 130579910
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Entry
130579910 CDS
T09178
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmea04121
]
130579910 (ZSWIM8)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
130579910 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
130579910
NCBI-ProteinID:
XP_057233040
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFSWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAEAACEAGRSHGQEPGGPCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKSAVGKAKLPVSKGLASKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRNYRDAFEEDGGVYFSEG
PEPTVRSSSMAKKSPKDPMGEMGSGDDDLPSVDENSGGVSLKPEEVGXNGAAGGGDDGEE
EEDDYQVYYLNPQEVAKEDDDKAEGGIEEEQDMFAGIKPLEQENRMEILFACAEALYAHG
YSSEACRLTVELARDLLANPPDLKVEQPPAKGKKNKVSTSKQTWVATNTLSKAAFLLTVL
SERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRG
RAEELREGTLCDYRPVLPLMLASFIFDVLCTPVLSPTGSRPPSRNWNNEMPGDEELGFEA
AVAALGMKTTVSEAEHPLLCEGTRREKGELALSLMSTYKDDQSKLKKILDKLLDRESQTH
KPQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGTSVTQQTAVNTAVQSSPENFVE
KNAQESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASI
DSSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGG
ARAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSS
SGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNIL
VECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKE
QDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSASGA
RAASEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHT
QGLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTP
SLAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLS
SQPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSP
PYTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRT
PAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQN
LKRSKQTKELWQRVSLEMTTFSP
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactctgat
cgctttgaagaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcggctggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccatty
gaggtggtggagaaagtttatcctccagtgcctgagcaactacaacttcgaatygccttc
tggagtttcccagaaaatgaggaagatatcaggttgtactcgtgcttggcgaatggcagt
gcagatgagttccagcgaggggagcagctctttcgggtgagggctgtcaaagaccctctc
cagataggcttccatctgagtgccacggtggtgcccccgcagatggtgccccccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacatcgtgcagctgcacctgc
ggcgccggggccaagtggtgcgcccacgtcgtggcactctgcctcttccgcatccacaat
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggctacaaagagac
cagttgcaaaaatttgctcagtacctaatcagtgagcttccacaacagattcttccaact
gctcagcgcttgctggacgagctgttatcttcccagtctactgccatcaacacagtgtgt
ggagccccagatcccactgctggaccctctgcatcagatcaaagcacctggtacttagat
gaatctactctgagtgacaacataaagaaaacccttcataaattctgtggaccctctcct
gttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtcccctgcgaggaagagaacctgagggaatctggaacttg
ctttccattgtgcgggagatgttcaagagacgggatagcaatgcagctcctttgctggag
attctgactgatcagtgtctcaactatgaacagataaccggctggtggtacagtgtgcga
acgtctgcgtcacacagcagtgccagtgggcacacaggacgcagcaatggccagtcagaa
gtagctgctcatgcttgtgcaagcatgtgtgatgagatggtggtactctggaggctggct
gtccttgacccaactattagtccgcagaggcgcagggacctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagagaggtcagcacaagaaatcactggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcagctgggaggaggcttat
cccattcctgggattacatatagcagcactgacaagaagaactcgttctgttgggtaaag
gccatccagcagaggagctgccgcttgcagtgtgcagaagctgcctgtgaggctggtaga
agccatggccaggagcccgggggaccatgcctgcagcccggggacaggctgcggccctct
ccccaggagccagcggttcggccaaaggaacttactggaaagcggaaagttgtctctgaa
acaccacagagggttctgaggcggctctcagcagaaggggacaaagctgtgtataagagt
gcggtgggcaaagcaaagttgccagtgagcaaaggcttggccagtaaacatagtgggaaa
cgccgcatgagcagtgaggacagctctctggagccagacttggcagaaatgagcctggat
gacagcagcctggcgctgggggcagaagccagcaacacctttagttttacagaaagtcca
ctgagcaggaactatagggatgcctttgaggaggatggtggggtgtacttctctgaggga
cctgaacccactgtcaggagcagttccatggccaagaaatcccccaaggatcccatgggg
gagatgggtagcggcgatgatgacctgccttctgtggatgagaactccggtggtgtgagt
ctgaaaccagaagaggtgggagasaatggtgcagcagggggaggggatgatggagaagaa
gaggaagatgattaccaggtgtactatctgaatccacaagaggtagccaaggaagatgat
gataaagctgaagggggaattgaagaggaacaggatatgtttgctggtataaagcctctg
gaacaggagaaccggatggagattctgtttgcctgtgcagaggccctttatgcacatgga
tacagtagcgaggcttgycgcttgactgtagagcttgccagggacctactggccaaccct
ccagatctcaaagtggagcagccaccagctaagggcaaaaagaacaaggtatcaaccagc
aagcagacatgggtggcaaccaacaccttgtctaaagctgccttcttgctgactgtgttg
agtgagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctg
cagagaccacctgcctcyaccaaggctcttgaggtgaagctggcttatcaggaatctgag
attgcagccctcttgaagaagattcccttgggcaccaatgagatgaacactattcgagga
agagctgaagaactgcgagaagggacgttgtgtgattaccgtcctgtcctgcctctgatg
ttggcaagctttatatttgatgtcctttgcactccagtgctttctcctacaggctctaga
cccccaagccgtaattggaataatgaaatgcctggagacgaagagcttggttttgaggca
gctgttgctgctcttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgt
gaaggcacacgaagggagaaaggggaactggcattatccctgatgagtacttacaaggat
gatcagtctaagctgaagaagattttagacaaacttctggacagagagagtcaaactcac
aaaccacaaactctgagttctttctactcatccagcaagcctacagttgcaaatcaaaaa
tcgccttccaaacatgctgcccagtctgctgcagctatccagcagcttccagggacttct
gtcactcagcaaactgctgtaaacactgcagtccaaagcagtcctgagaacttcgtggag
aagaatgcacaggagagctctcagaggtccccctgtgagccagctgcggaggccactgtt
ttgaaacaagaaggaaaggtccccagtcgtttggcccttggaaaccgaggtggatacaat
gggagatgctggggttcacctgtcaggcagaagaagaagcacacaggcatggctagtatt
gacagcagtgctcctgaaaccacctctgacagttctccgacgctcagtcggcgtccccta
cgtggaggctgggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagt
tcttcaagtgattcgctgggatcttcgtcttccagtggcagtaggagagccagtggggga
gcccgtgcaaagactgtggaagttggcaggtataaagggaggcgactggaaagccatgct
cctcatgttccaaaccagccctcagaagcagctgctcacttctactttgaattggccaag
acagtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcctcc
agtggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctg
tatgcactggggctgcacaacttcgtgtctcccaactggctctctcgaacttactcctcc
catgtctcttggatcacagggcaggccatggagattggtagtgcagccttgaacatcttg
gtggagtgttgggatggacatctaacacccccagaggtggcatcactggcagacagagct
tcacgggccagagactccaacatggtgcgggcagctgctgaactggcgctcagctgcctg
cctcatgcccatgccctgaacccaaatgagatccagagggctctggtgcagtgtaaggaa
caggacaacctgatgctggaaaaggcctgcatggcagtagaagaggcagccaaaggaggc
ggtgtgtacccagaagtcctctttgaagtagctcatcagtggtactggctctatgaacag
actgttggtggcaccccagcccagagagaaggtgccactggctgcagcgctagcggcgca
cgggccgcgtcagaagcggcgcgggggttggcagacagccgggtgacctcggagcccacc
acrgtgacagtggcagctgcagtgactgcggcagcaaccgtcatgccagtgatctctgtg
gggtccaccatgtaccagcagcacacggtggcagggccagcaatggcacatacacacacg
cagggtctccacccttacaccacccttcagactcacatcccctgtaacccccagtatatc
ggacacactatccagcacatgccgcgcccagctgtcttcccrgtccctggctcggcgtat
ccccagggtgtccatccagcattcatcggggcgcagtacccttactcagtaacaacaccg
tcgttggcagctacagcagtgtccttccctggygtgcccgtcccctccatgacgcagatt
gctgtgcatccctatcacagtgagacgggactatcgctgtcttccaatgtagcgctaggc
agtgtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcc
tcacagcccaactcccttgttacagggggttttcctgctgaggatgagcagcacagtcag
cctgtgagcccccagggtctgcactacctccactctgcataccgagttgggatgctggct
ctggagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccg
ccctacactgaggatgtaaaatggctccttgggttagctgcaaagttaggtgtaaactat
gtgcatcagttttgtgttggtgcagccaagggggtgctgagcccttttgtgctccaggag
atcatcatggaagctctacagaggctcaaccctgcccatgtgcacaaccatctccgcacc
ccagccttccaccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcat
cggctsatccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgcc
agaagcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaac
ctaaagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccacc
ttctcaccatga
DBGET
integrated database retrieval system
