Malurus melanocephalus (red-backed fairy wren): 130580454
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Entry
130580454 CDS
T09178
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130580454 (ZC3H12B)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
130580454 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
130580454
NCBI-ProteinID:
XP_057233943
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MTAWSMVGKLKMEKRRSREDRNVEQEAGECDAESEEWTSSESEPEQPYFRSNTQWREKEV
STKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKPNLDKEYQAKMDFALKLGYAGDQIQA
VLNKLGADALINDVLAELVRLGNKSESEGQSTASSTTSTLVSRGPCPKEIASPEXSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSXSKGE
ISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAA
GALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGD
HGYYSLLSDFSNLSMSSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLY
LGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLH
AQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLC
REQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEP
REPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcgctccagagaagac
agaaatgtggaacaagaagcaggggaatgcgatgctgaatctgaggaatggacgagctca
gaaagtgagcctgagcaaccatacttcagaagcaatactcagtggagagaaaaggaggtt
tccaccaaaccgcatcggccactctgccgctccccatgtttggatcgcccaagcttttca
cagagcagtatcacacaagacttgaagctagatgaatgcaaaccaaatctggacaaggaa
taccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcagatccaggct
gtactgaataagttgggagcagatgcgctcatcaacgatgttctagcagagcttgtgaga
cttggcaacaaaagtgaatcagagggacagagcactgccagcagtaccacaagtactctg
gtgtcaagaggcccttgcccaaaggaaatagcaagtcctgaatygtcactggaagatgaa
gtggtggataacagtgataacttgaggccaattgtcattgatggaagcaatgttgctatg
agccatggaaataaagaaggattttcctgccggggaattcaactagctgttgattggttt
ctggaaaaaggacataaagatatcactgtgtttgtaccagcatggagaaaagaacagtct
cgacctgatgcaccaatwacagatcaagaaatcttacgtaaattggagaaagaaaaaatt
cttgttttcaccccatctcgaagagttcagggaagaagagtagtttgctatgatgatcga
ttcatagtaaaacttgcttttgactcagacggcatcattgtatcaaatgataactatcgg
gatcttcagaatgaaaaacctgaatggaagaagttcatagaggagcggctgctaatgtat
tcttttgtgaatgacaaatttatgcctccggatgatcctttaggacgccatggtccaagc
cttgaaaatttcttaagaaaaaggccagttattcctgaacataagaaacaaccgtgtcct
tatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaacgtgcaaac
cagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatctgctgtgaaa
actatgagtgagggagccttggccaaatgtggcacagggccatccarctccaaaggagaa
atcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagcattaggtca
gtagctgtggagcctgaggaaaagttatcagcagcccggaagtccgaggccagctctgtc
ccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgcagct
ggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacagttcgtacat
cagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatactagtcaccaat
agccatggcacctcagttagctatattgaccagtatcccaaatatgagtcactgggggac
catggctattactccttactcagtgatttctccaacttaagcatgagtagtatccgtaac
tcagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccctgt
cctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttgtat
ctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactgccatcgaaa
aatcgtcttcagcctttcccccatggttaccatgaagccttaaatagaggtcagagttat
ggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccacttaggcctacat
gcccagcatccagttgttggagcacggtccagttgtccaggagaataccctgtgcctcaa
aatgttcatccatcgactgcacaaccaagccgtgccttggtgatgacaagaatggacagc
atttctgactcacggctttatgaaagtaaccctacaaggcagagacgaccacctctctgt
cgagagcagcatgccagctgggatccattgccatgtgcatcagactcctacacttaccac
tcgtatccactgagtaacaacctcatgcagccatgttacgaacctgtcatggtgagaagc
atgcctgagaagatggagcagctctggagaaatccctggattgggatatgtggtgagcca
cgggaacctcatatcatcccagaacatcagtatcaaacatacaagaacctctgcaatatt
ttccctccgagcattgtcctttctgtgatggaaaagaatccccacatgacagatgcacaa
cagctggcagctatgattgttgccaaattaagaacagggcgttaa
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