Malurus melanocephalus (red-backed fairy wren): 130580947
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Entry
130580947 CDS
T09178
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04137
Mitophagy - animal
mmea04140
Autophagy - animal
mmea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130580947 (HIF1A)
04137 Mitophagy - animal
130580947 (HIF1A)
04148 Efferocytosis
130580947 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130580947 (HIF1A)
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130580947 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
130580947
NCBI-ProteinID:
XP_057234756
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MRLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKC
MGLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRG
RTVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTEC
MLKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESD
EQQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPN
TEPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFA
IDTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSSQSAGTITIFQQ
SQTAPSSAEEMKPAVERADDVKTIIIPSSPVRGVAESSSAPASPYSGSRSRTASPIRAGK
GTVDQVEKPSPGAPSLLTVTLNKRSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGI
GSLFQQTGDRGGNASLAWKRVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQ
LTSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaccatcagctacctgcgcatgaggaagctgctggatgctggtgagctggag
acagaagccaaaatggagaaggaactgaactgtttctacttgaaagctctggatggcttt
gtcatggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaataagtgt
atgggactcactcagtttgagttgacggggcacagtgtatttgatttcactcayccatgt
gaccatgaggagctgagagaaatgcttacccacagaaatggtcctgtgaaaaagggcaaa
gagcaaaacacggagcgcagcttttttctcagaatgaagtgtaccttgactagcagggga
agaacagtgaatataaagtctgctacrtggaaggtgctgcactgcactggccacatccgt
gtgtacgacacgtgtgggaaccaaactcactgcggatacaaaaagcctcccatgacctgc
ctggtgttgatctgtgaacctattcctcacccatcaaacattgaggtccccctggacagt
aaaacgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaatt
acagagttgatggggtacgagccagaggagctcctgggtcgctcaatctatgagtactat
cacgcactggattctgatcatctgaccaaaacacaccacgacatgttcacaaaagggcag
gtgacaacaggacagtacagaatgctggcgaaacaaggtggctatgtctgggttgaaact
caagcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgtgtgaac
taygtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgt
atgctgaaaccagtggagtctcctgacatgaaaatgaccaaaatattcagtaaagatgac
ctggatgataccaacagcctatttgaaaaacttaaacaggaaccagatgctttaactgtg
ctggccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgat
gagcaacaatgtgatgaagttcctttgtataatgatgtaatgctcccctcatccagtgag
aaattgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagcca
cttcgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaac
acagagccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagccct
tctgatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgcttt
gatgtggataatgatatggccagtgaattcaaactggaattagtggagaaactctttgcc
atagatacagaagcaaaaaatccmttctctactcaggaaaccgatttagatttagagatg
ttggctccttacatcccgatggatgacgacttccagctgcgctccttcgatcagctgtcc
ccgctggaaagcagctcctccagctcccagagtgcaggcaccatcaccatattccagcag
agtcagacagctccragcagtgctgaggagatgaagccggcggtggagcgcgcggacgat
gtsaagacgataattatcccttcctctcccgtgcgcggggttgcagagtccagcagtgcc
cccgcctcgccctacagcgggagcaggagtagaactgcctctcccatcagagcagggaaa
ggaacagtggatcaggtggaaaagccttctccaggagcacccagcttgctaacagtcact
ctgaataaaagatctactgcactggatgaagaactaaatccaaagatgctagctttgcat
aatgctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaatt
gggtctttattccagcagacaggtgaccgtggaggaaatgcttcacttgcttggaaacgt
gtaaagggatgcaaaacaaatggtcacaatggagtggagcaaaagacaatcattctacta
tcaactgacatagcaagtaaacttctagggcagtcgatggatgagagtggactcccccaa
ctcacgagttatgactgcgaagtwaacgctcccatacaaggcaacagaaacctgctacag
ggggaagaactgctcagagctctggatcaagttaactga
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