Malurus melanocephalus (red-backed fairy wren): 130580984
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Entry
130580984 CDS
T09178
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmea03009
]
130580984 (DDX55)
Enzymes [BR:
mmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130580984 (DDX55)
Ribosome biogenesis [BR:
mmea03009
]
Eukaryotic type
Pre-60S particles
Helicases
130580984 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
CTT_SPB4
SBF_like
SHOCT
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130580984
NCBI-ProteinID:
XP_057234827
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MEAVTEGSWSSLPVTLSPGVLRALRELRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPMFSQILLIGG
RNPIEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAANNTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAMFEK
GMKAFVSYIQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVAVN
TDSISFKDKNREKQRQKKLEQQRKEREENEGKKKFIKNKAWSKQKAKREKKKKVTAKRKR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGGQRFKAETVEDIESEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgagggcagctggagctcgctgccggtaacgctgagcccgggagtg
ctgcgggcgctgcgggagctccgcttccaccaaatgaccccggtgcagtctgcgaccatc
ccgctcttcatgagtaacaaagatgttgctgcagaagcggtcacaggcagtgggaaaacc
ttggcatttgtgattcccatactggaaatccttctcagacgggaagaaaaattaaagaaa
atgcaggttggagctataattatcacaccaacgagggaattggccattcaaattgatgag
gtgctgtcacatttcacaaaacacttccccatgttcagtcagattctcttaattggtggt
aggaaccccatagaagatgttgagaagtttaaggaacatggtgggaacatcatcgtggcc
accccrggtcgcctggaggatctgttcaggagaaaagctgatgggctggaccttgcaagc
tgtgtgaaggctctggatgtgctggttttrgatgaagcagacagacttctagatatgggc
tttgaagcaagcttaaatgccattctggactttttgcccaagcagagaaggacaggtctg
ttctcagctactcagactcaggaggtggagaacctggtgagagcaggtctgcggaatccc
gtccgcatctcggtcaaggagaaaggagtggcagcaaacaacacccagaaaaccccaaca
cgcctggagaactactacatgatctgcaaggcagatgaaaagtttaatcagttggtgcat
tttcttcggcagcacaaacaggaaaaacatctggtctttttcagcacrtgtgcctgtgtg
gaatactatgggaaggctttggaatccttaattaaacaagtgaaaataatgagcattcat
gggaaaatgaagcacaagcgtaacaagatttttaccgagtttcggaagctcccagggggc
attttggtgtgcacagatgtgatggcccgtggcattgacatcccagaagtgcactgggtg
ctgcagtaygacccacccagcagtgccagtgcctttgtgcatcggtgtggtcggacagcg
cggattggcaatgtgggcagtgcacttgtgtttttgcttcccatggaagaatcctacatt
aactttctctcaatcaaccaaaagtgtcccatgcaggaaatgaaaccrcagacaaatgtg
ttggatcttcttcccaagctgaaatccatggccctggcwgacagggcaatgtttgagaaa
ggcatgaaagcctttgtgtcttacatccaggcttatgccaaacatgaatgcaatctcatc
ttccggataaaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgttttccagactttactccagtcgctgttaat
acagactccatttcatttaaggataaaaatagagaaaagcagagacaaaagaaattagaa
caacaaaggaaagaaagagaagaaaatgagggtaaaaagaaattcataaagaacaaagca
tggtcaaaacagaaagccaagagggagaagaaaaagaaagtaacagctaaaagaaagcgt
gaagagggctctgatattgaagatgaggatatggaagaattgctgaatgacacaagactc
ttgaaaagattaaaaaaaggaaaaatcagtgaagaagagtttgagaagaaactaacaggc
ggccaaaggttcaaagcagaaactgttgaagacatagagtctgaaggctga
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