Malurus melanocephalus (red-backed fairy wren): 130581461
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Entry
130581461 CDS
T09178
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130581461 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmea03021
]
130581461 (TAF5)
03036 Chromosome and associated proteins [BR:
mmea03036
]
130581461 (TAF5)
Transcription machinery [BR:
mmea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130581461 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
130581461 (TAF5)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130581461 (TAF5)
STAGA complex
130581461 (TAF5)
TFTC complex
130581461 (TAF5)
SAGA complex
130581461 (TAF5)
SLIK complex
130581461 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
130581461
NCBI-ProteinID:
XP_057235557
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MAALHEEPAEVAAAQPDPEAGTSPPPPAVPPAAVAAAPAAVPVAAAEGEAAGAGGDAAPA
KPAAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGATALSPASAG
LLGGSGSDTDSGEALLGRGTSAAAVAIGGSVATVATSSPGVAAVAAVPPGKVGGTVVVED
QPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYN
QHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSY
QLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFF
GLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKD
SDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTV
RVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPD
RNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWAT
DHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHS
LAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNT
VRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAA
GAYSSQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgcatgaggagccggcagaagtggcggcggcgcagccggaccccgaggcg
gggacgtcgccgccgccgcccgcggtgcctcccgccgccgtcgccgccgctcccgccgcc
gtcccggtcgccgcggcggagggagaggcggcgggagccggtggggatgcggcacccgcg
aagcccgcggcgcccggcccggccgcttccccggcggcgctggaccggcagacgcttgtg
gccgtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctacgccgc
gaagcccgcctgctcggcgatgacctgggtgccaccgcccttagccccgccagcgccggg
ctcctggggggctccggcagcgacacggactccggcgaggcgctgctcggccggggcacc
agcgctgccgccgtcgccataggaggcagcgtcgccactgtcgcgacttccagccccggg
gtggccgcagttgccgccgtgccgccggggaaagttggaggcaccgtggttgtggaggat
cagccggatgtgagcgctgtgttgtcggcctacaaccagcaaggggacccgacgttgtac
gaggagtactatagtggattgaaacatttcattgagtgttccctggactgtcatcgggca
gaattgtctcagctcttttatcctctctttgtgcatatgtacttggaattggtctacaat
caacatgagagtgaggcaaagtctttttttgaaagatttcatggggatcaggaatgctat
taccaggatgacctgcgtgtattgtcgagcttaaccaaaaaagagcatatgaaaggtaat
gagaccatgctggatttccgaacaagcaagtttgtgctgcgcatttcccgcgactcttac
caactcttgaagagacatcttcaggaaaagcagaacaatcagatctggaacattgttcag
gagcatctttacattgatatctttgatggaatgcctcgcagtaaacagcagatagatgcc
atggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttcttt
ggcttgttgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaa
aatgaagaaggaaagccaaagaagaaaaaacctaaaaaagataatgtagggtcaaaaagt
aaaaaacaggaccctaatgctcctccccaaaacagaattcctctgcctgaactgaaagac
tctgacaagctggataaagtaatgaatatgaaggaagctgcaaggcgagtgcgtctgggc
ccagagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctgact
gcagtggatattacagatgactccagcatgattgtaggaggctttgctgactctactgtc
agagtgtggtccgtgactccaaaaaagctccgtagtgtgaaaacagcagcagatctcagt
ctcattgacaaagaatccgacgatgtcttggagaggatcatggatgagaaaacagcaagt
gagttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgat
aggaactatctattgtcctgttctgaggatggcactgtgagattgtggagtctccaaaca
ttcacgtgtttggtgggatataaaggacacaactatccagtatgggatacacagttctct
ccttatggttattactttgtgtcagggggacatgacagagtggctcgtctgtgggcaaca
gatcactaccagccattacggatctttgctggccatcttgcagatgtgacatgtacccga
tttcatccaaactccaactatattgccacaggctcagcagacaggactatacggctctgg
gatgttttgaatgggaattgtgtaagaatatttactggacataagggaccaattcattca
ttggcattttctcctaatggacgattcctggctacyggagcaacagatggaagagttctr
ttgtgggacattggacatggtttgatggttggtgaattgaaagggcacactgacactatc
tacgcactcagattcagtagagatggggagattttrgcatcaggttcaatggataataca
gttcgtctatgggatgctgtgaaggcatttgaagatttagaaactgatgactttactaca
gctactggacacataaacttgcccgaaaactcccaggacttgctactgggtacatacatg
accaaatcaaccccagttgttcatctccatttcacacgcaggaacctgctgctggctgca
ggagcctacagctcacagtga
DBGET
integrated database retrieval system
