Malurus melanocephalus (red-backed fairy wren): 130581499
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Entry
130581499 CDS
T09178
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130581499 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130581499 (VPS8)
Membrane trafficking [BR:
mmea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130581499 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
130581499
NCBI-ProteinID:
XP_057235608
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MAAPPEPAGPEPCLEPPAHRLSVAELDRELDSRSELIDDKEFDIPQVDTPPTLESILNET
DDEEESFVLEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRL
SLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLGSTVVGA
QYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPT
LAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVDLRDHPITQYSL
LAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVV
HFLLVKRDDSGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQTQEELET
VEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGTKSVHVMTL
RSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLTGDTNKRKAVIADRMVEILLHYT
DRALKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRMDLLFNQIYDKMSENSVAKGIFLE
CLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVVLLCWENR
LYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEHVVMGNKLLVYISCCLAGRA
YPLGDIPEDLVPLVKNQVFEFLIRLHSAEGSADEEVYPYVRTLLHFDTREFLNVLALTFE
DFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFD
QVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERQQ
RYDKIISCYLRDPLRKEEVFNYIHNILSIPGYSAEEKQLVWQKALDHIEELLVLSPGKAA
DLAAIHFSDQIESIISNLQDQFLLFQFLRSLLDPREGINQDLLHLPPCITEQFIELLCQY
SPDQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLM
LTQDDGSSAEPSLLENIEDTLMKTISLCQRNSHSLDQQQREALWFPLLEAMMSPQKSSGS
SQCPYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNY
EQTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETADEIIVFSC
GHLYHSLCLLSKGCGTVTKGLMRWICYKCNSSNKGGKLSENFSELKKGTVASLAQTSSES
VLDPQQIQAFDQLCRLNRGTSRLALLTELARGGHGGGDKHGLLSVSHGDPATSSVFQNEN
FQLHLTPPPLAEE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccccggagccagcggggcctgagccgtgcctggagccgcccgcgcaccgg
ctgagcgtggcggagctcgaccgtgagctggattctcgcagcgagctgattgacgacaaa
gaattcgacattcctcaagttgatacccctccaacactggagagcatcctaaatgagact
gatgatgaagaagagtctttcgttttggaggatccctttctcttgaacattgataacaca
gatacacactcctatgacacctcttctgtggccagctctgacagtggggacaggacacac
ctgaaaaggaagaaaaaactcccagattctctctcactccatgggtcagtgatacggctc
tcactcctgaagggaatttctgcccaaatagtgtctgcagcagacaaagtggatgctggc
ttgcccactgcgattgcagcatccaatctgatagcagtggggacttcccatgggctagca
ctgatatttgatcagaaccaagccctccggttgtgtctgggcagcaccgtggttggggcc
cagtatggggccatctctgctctcagcatcaacaatgactgttccaggctgctgtgtggc
tttgccaaaggacagatcaccatgtgggatctggccagtgggaagctgctgcgatcaata
acagatgctcaccccccaggaacagccattttgcacattaagtttacagatgacccgacg
cttgcaatttgcaatgacagcggaggctccgtgtttgaattgtcatttaagagggttatg
ggagtgagracgtgtgagtctcggtgtctcttcagcggctccaagggggaggtttgctgt
attgagccattacatgcaaaggttgacttgagagaccatcccatcacccagtattcactg
ctggccatggcctccctcactaagatcctggtkattggcctgaagccatctctgaaagtg
tggatgacctttccctacggccgtatggacccttccagtgtccctctgctggcatggcat
ttcgtggctgtgcagaactcggtgaaccccatgcttgccttctgtcgaggagacgtcgtg
cattttcttctggtcaagagagatgattctggtgcgatacatgtcacgaagcagaggcag
cttcatctgcactatgatctcatcaactttacttggatcaactcacggacagcggtgctg
ctggacagtgtggagaagctgcacgtcatagaccgtcagactcaggaggagctggagact
gtggagatctctgaggttcagctggtctacaacagcagccacttcaagtctctggccaca
gggggcaatgtcagcgaggccctggctctcgttggagagaaagcttgttaccagtccatt
agcagctgtggtggtcagatcttttaccttggaactaagtctgttcatgtcatgaccttg
agaagctggagagagagagttgaccaccttctgaaacaagaacgtctcacagatgccctg
gctcttgcttggtccttttatgaaggtaaagcaaaggctgttgtaggcttgactggggac
acaaacaagaggaaagcagtcattgctgacagaatggttgaaatccttctccattacact
gatcgggctctgaagaaatgtcctgaccaagggaaaatccaggttatggagcagcacttc
caggacgtggtgcctgtcattgtggattactgtctcctgctgcagcgcatggatttatta
tttaaccagatttatgataagatgagtgagaactctgtagccaaaggcatctttctggag
tgcttggagccatatatcttgagtgataagctgatgggaatcacagctcaagtgatgaaa
gatttgctgcttcacttccaagacaagaacaggttggaaaacttggaagcctgcattgtg
catatggatatcaccagcttagacatacagcaggtggttctgctatgctgggaaaaccgc
ctatacgatgccatgatctatgtctacaacagcgggatgaacgacttcatcagtcccatg
gagaagctgttcaaagtcattgctcctccactgaatgctgggaagtctctcacagatgag
cacgtggtgatgggcaacaagctgcttgtatatataagctgctgcttggcaggccgtgca
tatccattgggtgatattccygaagatctggtacctttggtgaaaaatcaggtgtttgaa
ttcctgatccggctgcactcagctgagggatctgcggatgaggaggtgtatccctatgtt
cggaccctgctgcacttcgacacgcgcgagttcctcaatgtcctggctctgacttttgaa
gactttaagaatgacaagcaagctgtggaatatcagcagaggattgtggacattcttctg
aaagtcatggtggagaattctgacttcactccatcacaggttggctgtctctttaccttc
cttgcccggcagctcgccaagcccaacaacaccttgtttgtcaacaggacactgtttgac
caggtgctggagttcctgtgcagcccggacgatgactcgcggcattctgagaggcagcag
gtccttttagagctgctccaggcaggagggattgtgcartttgaagagagccgcctcatc
caaatggcagagaaggctgagttctatcagatctgtgagttcatgtatgagcgacagcar
cgctacgacaaaatcatcagctgttacctgcgggatcccctgaggaaggaagaagttttc
aactayatccacaacattctgtccattcctggctacagtgctgaggagaagcagctggtg
tggcagaaagctttggaccacatagaggagctgctggtgctgagcccaggtaaagcagct
gacttggcagccattcacttcagcgatcagatcgagagcatcatctccaacctgcaggac
cagttcttgctcttccagttcctcaggagtctccttgatcccagagaaggcattaaccaa
gacctgctacacctcccaccctgcattactgagcagttcatcgagctgctctgtcagtac
agtccagaccaggttttggagacactcaaagttctggaatactgcaggctggaggagacc
atccagataacccagaaacatcagctccatgaagcttcttcgtatttactggagaaaaag
ggagatatccatggtgccttcttggttatgctcgagcgattgcagagcaagttgctgatg
cttactcaagatgatggaagctcagctgaaccctccttgctagaaaatattgaagatact
ttaatgaaaacaatttccctttgccagaggaattcacacagtttagaccagcaacagcga
gaggccctctggtttcccctgctggaggccatgatgtccccacagaaatcctctggttct
tcacagtgtccatactctgaatctttgaagagtttgacaatgcaagtgctgaacaacatg
gctgcatttattgctcttccytcaatcctgcagagaattctccaggacccagtttatgga
aaagggaaacttggagaaattcaagggcttgtcctgggaatgctggacacttttaactat
gaacaaacccttctggagacaaccacgagccttttaaaccatgatctgcactggtccctg
tgtaacctgagagcctctgttaccagaggcctcaccccaaagcaggattactgctgcatc
tgtctccaacagtacaaaaggaggcaagaaactgctgatgaaatcattgttttcagctgt
ggccacttgtaccactcgctgtgcctgctgagcaagggctgtggcacagtcaccaagggc
ctcatgaggtggatctgctacaagtgcaactccagcaacaagggaggcaagctgagtgag
aacttctccgagctgaaaaaagggactgtggcatccctggcacagacaagttcggagtct
gtgttggatcctcagcaaatccaagcttttgaccagctctgccgactcaaccgaggcacc
tctcgactggcactgctgacagagctggcacgtgggggccatggtggcggtgacaagcac
gggctgctcagcgtttcccacggggaccctgccaccagcagtgtcttccagaacgagaac
ttccagctgcacctgacaccccctccgctggctgaggagtag
DBGET
integrated database retrieval system
