Malurus melanocephalus (red-backed fairy wren): 130581529
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Entry
130581529 CDS
T09178
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04510
Focal adhesion
mmea04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130581529 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130581529 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130581529 (TNR)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130581529 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_Tenascin
Pur_ac_phosph_N
Fn3_Dep-1_2nd
FN3_Tor_3rd
EGF_2
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
130581529
NCBI-ProteinID:
XP_057235662
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MGTDKENPILRNVLISFNLLLLGTVLKPFECRLEMTAEPAERTAVDEAGALTNCSPPAKE
QPMVFHHIYNINIPLDSCCSSMFKSSAEEVSSEDERLAEYTEQTSDSESQVTFTHRINMP
KQACKCSTSLPSLQELLSRIEMLEREVSILRDQCTSNCCQENAATGQLDFIPQCSGHGNF
SLESCSCVCMEGWAGSNCSEPLCPRGCSSRGVCLEGQCICDSDYGGEDCSQLRCPAGCGS
RGLCVDGECVCEEGFTGEDCSQLRCPRDCSGQGQCVNGSCVCQEGFAGEDCAWLHCPNAC
SGRGLCRDGLCVCQEGFGGQDCAAVAPPENLHVTGISDSSIXLAWDSPGAATEYVISYQP
AVPGGTQLQQRVPGDWSSITIMDLEPGVAYNVSIYAVISDIFSIPITAKVMTNLATPQGL
KFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKEQARSPPTSDSISTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDAILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESQPALAQFTTEIDAPKNLR
VGSRSPASLELAWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKATGPIDHYRITFT
PASGMASEVTVSQDESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPISQLH
FSQLTSSSVNVTWSDPSPPADRLILTYSPQDKEEAQQVTLDGTRRHASLTGLQPSTEYLV
SLVAVHGTISSEPVVGSITTGIDAPKDLRVGNVTQESMIVYWSAPMAAFDHYRISYRAAE
GRTDSMAISRDATEYTLHQLQPATKYEIGVKSVRGREESELASITVYTAMDVPLGVTATN
ITPTEALLQWNPPLSEVESYVLILTHHAVAGETILVDGDSQQYQLTNLLPTTTYTVSMYA
TNGPLTSQIISTNFTTLLDPPTNLTASEVTRQSALLSWVPPVGEIENYIMTYRSTDGSRK
ELIVDAEDTWIRLEGLSETTEYTVRLQAAQNAVRSGFISTTFTTGGRVFANPQDCAQHLM
NGDTLSGVYTISINGDLSQRLPVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGN
LEDEFWLGLDNIHRITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRIGDYNGT
SGDSLSYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINW
YHWKGHEFSIPFVEMKMRPYNHRNISGRKRRTLQL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacaaagaaaaccccatcctgaggaacgtgctcatcagcttcaacttgctt
ctgctcggcactgtcctcaagccttttgagtgccggctggagatgacagcagagccagct
gagaggacagcggtggatgaggcaggtgctctcaccaactgcagcccacctgccaaagag
cagcccatggtcttccaccacatctataacatcaacattccactggacagctgctgctca
tccatgttcaagtcttcagccgaggaggtgagttcagaagacgagcggctggcggagtac
acggagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacatgccc
aagcaggcctgcaagtgctccacctccctcccatccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatcctccgggaccaatgcacctccaattgctgccaa
gaaaatgcagccacagggcagctggatttcatcccgcartgcagcggccacgggaatttc
agcctggagtcgtgcagctgcgtgtgcatggagggctgggcgggcagcaactgctcggag
ccgctgtgcccccggggctgctccagccgcggcgtctgcctggagggacagtgcatctgc
gacagcgactacggcggcgaggattgctcgcagctccgctgcccggccggctgcggctcc
cgcgggctctgcgtggacggcgagtgcgtgtgcgaggaaggtttcaccggcgaggattgc
tcgcagctccgctgcccccgagactgctcggggcagggtcagtgtgtgaacggctcgtgt
gtgtgccaggaggggttcgccggcgaggactgcgcctggctgcactgccccaacgcctgc
agcggccgggggctctgccgcgatgggctctgcgtctgccaggagggctttggaggacag
gactgcgctgcagtggctcctcctgaaaacctgcatgtgacagggatcagcgacagctcc
atcragctggcatgggacagccccggggcagccactgagtacgtcatctcgtaccagcct
gcagtgccagggggcacacagctccagcagcgrgtacctggggactggagcagcatcacc
atcatggatctggagccaggtgttgcytacaatgtcagcatctacgcagtcatcagtgac
atcttcagcatccccattactgccaaggtgatgaccaaccttgccacaccacaggggctg
aagttcaagaccatcacagagacaacagcagaggtgcagtgggagcccttctccttcccc
ttcgayggctgggagatcagcttcattcccaagaacaatgagggtggtgtgatcgcccag
ctgcccagcaccgtcaccaccttcaaccagacagggctgaagccaggggaagagtacacc
gtgaccgtggtggccctgaaggaacaagccaggagccctcccacctccgacagcatctca
acactgatcgatggcccgacgcagatcctggtgcgggatgtctccgacacggtggccttc
gtggagtggacaccaccacgtgccaaggtggacgccatcctgctgaagtatgggctggca
gacggggagggcgggaggaccaccttccgcctgcagccccccctgagccagtactccctg
caggccctacgccccggcgcccgctaccacctcgccgtcagtgccctccggggtgccaac
gagagccagccagcccttgcccagttcaccacagagatcgatgcccccaagaacctgcgg
gtgggctcgcggagccccgccagcctcgagcttgcctgggacaacagcgaggcggaggca
cacagctacagggtggtgtacagcaccctggccggggagcactaccacgaggtgctggtg
ccccgcgacaccgggcccaccacccgggccaccctcgcagatctggtgccgggaacagag
tatggcattgggatttcagccgtgatggacagccagcagagtgtgccagcgaccatgaat
gccaggactgagcttgacagccctcgggacctcctggtgacagcctccactgagacatcc
atctcgctggcttggaccaaagccacaggtcccattgaccactaccgcatcaccttcacc
cctgcctcaggaatggcctctgaagtgacagtgtcccaggacgagtcacagctcaccctc
tcagagctggagcctgggacagagtacaccatctccatcattgcygagaggggacggcag
cagagcctggaggccaccgtggatgccttcacaggtgttcggcccatctcccagctgcac
ttctcccagctgacatcatccagtgtgaatgtcacrtggagtgacccatccccaccagca
gaccggcttatcctcacctacagcccccaggacaaggaggaagcccagcaggtcacactc
gatggcacccgcaggcacgccagcctgacgggcttgcagccatccaccgagtacctggtg
tcactggtggctgtgcatggcaccatcagctccgagcctgtggtgggctccatcacaaca
gggatcgatgcaccaaaggacctcagggtgggcaacgtcacccaggagtccatgatcgtg
tactggagtgctcccatggctgcctttgaccactatagaatatcctaccgtgctgccgaa
gggaggacagacagtatggccatctccagggatgccaccgagtacaccctccaccagctg
cagcccgccaccaagtatgagatcggggtgaagagcgtgcggggccgcgaggagagtgag
ctggcctccatcaccgtgtacacagccatggatgtcccyctgggggtcacggccaccaac
atcactcccaccgaggcgctgctgcagtggaacccgccactgtcggaggtggaaagctat
gtcctcatcctcacacaccatgcagttgcaggggaaacaattcttgtggatggagacagc
cagcagtaccagctgaccaacctgctgcccactaccacctacacggtctccatgtacgcc
accaatgggcctctcaccagccagatcatcagcaccaacttcaccactcttttggatcct
ccaacaaatctgacagccagtgaagtcaccagacagagtgccctgctctcctgggttcct
cccgtgggagagattgagaactacatcatgacctacagatccaccgatggcagccggaag
gagctgattgtggatgctgaggacacgtggatccgtctggaggggctttctgagaccaca
gaatacaccgtgcgcctgcaagctgcccaaaacgctgtgcggagcggcttcatctccacc
accttcaccacaggaggacgtgtctttgctaaccctcaggactgtgcccagcacctgatg
aacggrgacacactaagcggggtctacaccatctccatcaatggggacctcagccagcgg
ctgccagtgtactgtgacatgaccaccgatggaggtggctggattgtcttccagaggcgg
cagaatgggctgactgatttcttccggaaatgggcagattaccgagttggctttggaaac
ttggaggacgagttttggctgggcttggacaacatccacaggatcacatcccaagggcgc
tatgagctgcgaatagacatgagggacggtcaggaagcggcctatgcctattatgacaag
ttctccattggtgactcccggagcttgtayaaactgcgaatcggggactacaatggcact
tcaggagactccctcagctatcatcagggacgtcccttctccaccaaggacagggacaac
gatgtcgctgtgaccaactgtgccatgtcctacaaaggggcctggtggtacaagaactgt
caccgcaccaacctcaatggcaagtacggagagtcccggcacagtcaggggattaactgg
taccattggaaaggccacgagttctccatcccctttgtggaaatgaagatgcgaccttac
aaccaccgtaacatctctgggaggaagcgacggaccctacagctctga
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integrated database retrieval system
