Malurus melanocephalus (red-backed fairy wren): 130581966
Help
Entry
130581966 CDS
T09178
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmea03036
]
130581966 (TDRD12)
Enzymes [BR:
mmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
130581966 (TDRD12)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130581966 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
EFhand_Ca_insen
Motif
Other DBs
NCBI-GeneID:
130581966
NCBI-ProteinID:
XP_057236378
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MEVVVLKIEDPSCFWIAVKECAPGIVNERAYENLNTEMNQFYDNYKDSDEIKPEZIEKGQ
VYVVFSEELRCWCRALVQSVRCCGDGYQLGCFLVDHAKYYSVASENIRVLAKAFAKIPDR
AKKCCLYCTKPLTLHIDFCENTAKIGPAKRWDTAAXQHFRKLVEDATEVKATIQVVKDKV
LEVFLFVTVRDEKICVNDDLVAKHFAHYKEAEXSAGSSPDDFDDDVSLNAECVPVEFVGP
TFVARPKLPFGEKVSPHPEPGLAGFNSVVEKKSQSSSPVLNDNTLPEVNTVPRLPLMEDK
AVQTDRLPQFLNSNSLQSHMVEVDQQSFQNLGXEKNFVFLSKKIEPSSVLETAPLFDGVK
KELARNKFSGPTFTESYCWPPVTSGYDIVAISHQGNDPLLYIPPVLTLLQFKSASQALPN
TNGPLALILCPGWKKAQLVFDLLKRYGRCCRHLYPMLIILGQNKEAASQVEIRGCEVVVT
TPYNLLRLLEHHTWLLCRLCHLVLDEIEVLFSDTTEQVFTVLDCYKKAAAQPQGKPHQII
AVGTQWNKHITPLMKEFMRDPYVVITVVEEAAIFGNVQQVVQPCSNKTAELLKILDFTQR
NLQKVLVFADSVPEVDMIHKVLKSNSVVSLKKHKESKCNAKCVLDQWKRMHNSGTPAVLV
LTDDCLPSLGITDATCVIHFSFPSPEVLGQRLQSTADSFCSVMKDSSVDQEHTKAKSIIL
LTVSSSCHAPGVLRYLKHAEAEIPEELYDLTAKMLESEQDEKLSRPLCTSLKTFGICRNR
TWCPDRHQINSSIDMAQNIADEMIETPERVTILPLLIVHATNYFGRIVKKQKDQYTALAK
EMSDYFKIPGRRIPVNAVEKSVFYGLWEGAICHRVQVVETPAKEEENICKVTVKYIDEGR
TSQVNSDQLLHLPVRFQSLPPQAVEIIVCRVKPIDNEVKWNPKVTDHIDHKIKGKLHHAK
VVHTLGKTVWVDPMVGVTSLPGMKLWINEYNIRSEILSTGLGTDNPEHVAEIQKLCRQMP
ILDHAENMERLSTKPETTVEECRTSAQALLVRSTKEDTAVLEEASDPQDTPMQENSAESC
NTSASPPSDDGAQTEEAEDYTVHQQKSCHPHIKWFQDNXTVTLKVQILRAADSKCKFSKE
KVAFSAYSEGKFYVANLDLYQSIIAEKSKCVTKDTEAVVLLVKEKKGMWCKLLKNKNVHV
SLDFEHWEESEDERPFTVGPPKLTCPPAGSEDWVESSEESDTDSDE
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtggtattaaagatcgaagatccaagttgcttttggattgcggtgaaagaa
tgcgcgccaggtatagtcaatgaaagagcatatgaaaacctcaacactgaaatgaaccag
ttctatgacaattataaagactcagatgaaataaaaccagagsagatagaaaaaggccag
gtttatgtggttttcagtgaggaactcaggtgctggtgtagggctcttgtgcagtcagtt
cggtgctgtggagatggttaccagcttggatgtttycttgtggatcatgccaaatactat
tctgttgcatcagagaacattcgagttttagcaaaagcatttgctaagatcccggataga
gcaaagaagtgttgcctgtactgcacaaagccactgacattgcacatcgacttctgtgaa
aacactgccaaaataggaccagccaaaagatgggatactgctgccrtccagcattttaga
aaacttgttgaagacgctaccgaggttaaagccacaatacaggtagtaaaggataaagtg
ttagaggtgttcctttttgtgactgtgagagatgaaaagatctgtgttaatgatgatctg
gttgcaaagcactttgctcattataaagaagctgaagkcagtgcagggagttctccagat
gattttgatgatgatgtgtcactaaatgctgagtgtgttccagtggagttcgttggtccc
acatttgttgccaggccgaaactgccatttggggagaaagtgtcaccacatcctgagcca
ggtcttgctggttttaattctgttgttgagaagaaatcccagagttctagcccagttcta
aatgacaatactttgccwgaggtcaacacagtgccacgtttgcctttgatggaagataaa
gcagttcaaacagacaggcttccacagttcttaaattccaattcccttcagtcacacatg
gttgaagttgaccagcagagttttcaaaatcttgggraagaaaaaaactttgtgttcctt
agcaagaaaattgagccatcgtctgttttggagacagcaccactttttgatggtgtgaaa
aaggaacttgctcggaacaagttttcaggccccaccttcacagagtcctactgctggcca
ccagtaacttcgggatatgatatcgttgccatctcacatcagggaaatgatcccttatta
tatattccaccagttcttacccttttgcagttcaagagtgcttcccaagccttaccaaac
acaaacggaccactggcactcattttatgtcctggatggaagaaggcacaacttgttttt
gacctactgaaaagatatgggagatgctgcagacacctttatccaatgctgataatcctt
gggcagaacaaggaagcagccagccaagtggaaatccgaggctgtgaagtagtggtgact
acaccgtacaacctcctgagaytgctggaacatcacacttggttattgtgtaggctttgt
catcttgttcttgatgagatcgaggtgctgttctctgacactactgaacaggtgtttact
gtactagactgttacaagaaagctgctgctcaaccacagggaaagccacatcagatcatt
gctgtgggaactcagtggaataaacacatcacacccttgatgaaggagttcatgagggat
ccttatgttgtgataacagttgttgaagaagctgccatctttggaaacgtgcaacaggtg
gtgcagccttgcagtaataaaactgctgagttactcaaaatactggattttacccagagg
aatcttcagaaggtgctggtatttgctgactcagtacctgaagtagatatgattcataag
gtattgaaaagcaactcagtagtttccttgaaaaaacataaggagagcaagtgtaatgcc
aagtgtgtcttggatcagtggaaaagaatgcacaattctggcactcctgctgtgttagtt
ttaacagatgactgcctgccgtctttgggaatcacggatgcaacttgtgtgatccatttc
agttttccatctccagaagtcttggggcagcgcctgcaaagcacagctgacagcttctgc
agtgtgatgaaggattcttctgtagatcaggaacatacaaaggccaagtcaatcatcttg
ctgacagtgagcagttcctgtcatgcacctggggttctccgctatctaaagcatgcagaa
gctgaaattccagaagaactctatgatttgactgccaagatgctggaatctgaacaagat
gagaaattgtcaaggcccctgtgtacttctcttaaaacatttgggatttgcaggaataga
acatggtgtccagatcgtcatcaaattaattcatcaatagacatggcccagaacattgca
gatgaaatgatagaaacacctgaacgtgtgacaatcctgcctctcctcattgtacatgca
acaaactactttggtcgaatagtcaagaaacaaaaggaccaatacacagctcttgccaaa
gaaatgagtgattatttcaagataccaggacgtaggattcctgttaacgccgtggagaag
tcagtgttttatgggttatgggagggagccatttgccacagggttcaggtggtagagact
ccagcaaaagaggaagaaaatatctgtaaggtcacagttaaatacatagaygaaggcaga
acaagtcaagttaatagtgatcagctgcttcacttacctgtaaggtttcagagtctgcca
cctcaggctgtggaaatcatagtttgtagagtaaaacccatagataatgaagtcaaatgg
aatccaaaggtgactgatcacattgatcacaaaattaaaggaaaattacatcatgcaaaa
gtggtccataccttgggaaagacagtttgggttgacccaatggttggggttaccagcctt
cctggtatgaagttgtggatcaatgagtacaatattcggtctgagattttatcaacgggg
ttgggaactgacaatccagaacatgtagcagaaatccagaagctgtgcagacaaatgccc
attttggatcatgcagagaacatggagcgtttatccactaagcctgagactactgttgaa
gaatgcagaacttcagcacaggctttgttagtaagaagcacaaaagaggacacagctgtt
ctagaggaggcatctgatccacaggatacaccgatgcaggaaaattctgctgaaagctgt
aacacttctgcaagtcctccaagtgatgatggagctcaaacagaagaagcagaagactat
actgtgcatcagcagaaaagctgtcatccacacatcaagtggtttcaagataatgygact
gttacactgaaggtgcaaatactgagggcagctgacagtaagtgcaagttctccaaagag
aaggtggctttcagtgcttactcagaaggcaaattttatgtggctaacctggacctgtat
cagtcaataattgcagaaaaatccaagtgtgtgactaaggatacagaggctgtggtttta
ctggtaaaagagaaaaaaggaatgtggtgcaaattrctgaagaacaagaatgttcacgtg
tccttagattttgaacattgggaagagtctgaagatgaaaggccttttacagttggtcct
ccaaaactgacttgccctcctgcaggatccgaggactgggttgagtcctcagaagaaagt
gatacagacagtgatgartaa
DBGET
integrated database retrieval system
