Malurus melanocephalus (red-backed fairy wren): 130582031
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Entry
130582031 CDS
T09178
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130582031 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130582031 (EXOSC1)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130582031 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
130582031 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
130582031
NCBI-ProteinID:
XP_057236491
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPARYCIPGERLCSTEEATAGSGTYIRHGFIFSSLAGCLERKNEDSELPVVSVVRDSE
SQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
EFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccgcacgctattgcattcctggtgagcggctgtgcagcacggaggaggcc
acggctggcagcgggacctatatccgtcatggcttcatcttctcctcgctggcyggctgc
ctggagaggaagaatgaggacagcgagctgcccgtggtgtcggtggtgagagacagtgag
tcccagctcctccccaatgtgggggccgtggtgacatgcaaggtctgcagcattaactct
cgctttgccaaggtgcacatcctgtatgttggctccacaccgctgaaatccaccttccga
gggaccattcgtagagaagatattcgagccacggagaaggataaggtagaagtgtacaag
agcttccgccccagtgacatcgtcttggccaaagttatctccctgggggatgcacagtcc
aactacctgctgagcacagcagagaatgagctgggcgtggtggtggcacgcagcgaggca
ggggtgcagatggtgcccatcagctggtgcgagatgcagtgcccacggacacacaccaag
gagttccgtaaggtggcccgggtacagccccagttcctgcagacgtaa
DBGET
integrated database retrieval system
