Malurus melanocephalus (red-backed fairy wren): 130582522
Help
Entry
130582522 CDS
T09178
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea00260
Glycine, serine and threonine metabolism
mmea00630
Glyoxylate and dicarboxylate metabolism
mmea00670
One carbon pool by folate
mmea01100
Metabolic pathways
mmea01200
Carbon metabolism
mmea01230
Biosynthesis of amino acids
mmea01240
Biosynthesis of cofactors
mmea04981
Folate transport and metabolism
Module
mmea_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130582522 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130582522 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130582522 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
130582522 (SHMT1)
Enzymes [BR:
mmea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130582522 (SHMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
130582522
NCBI-ProteinID:
XP_057237261
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MANSTQSLPSAELWASHNKMVLEPLETNDPEVHSIIKKEKQRQKLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYRLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI
DYDQLEANARLFHPKLIIAGVSCYSRNLDYARMRKIADDNGAYLMADMAHISGLVAAGVV
PSPFDYCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETVYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALQQAMTPEFKAYQQQVVANCKALSTALMEMGYDIVTGGSDNHLILV
DLRSKGTDGSRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRKV
AQYIHRGIELTLRVQKDMSPKATLKEFKDKLEEPKYRGELKALKDEVEAFAATFPLPGLP
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcaacacagagcctccccagcgccgagctctgggcctcccataacaagatg
gtgctggagccgcttgaaaccaatgacccagaggtgcacagcatcatcaagaaggaaaag
cagcggcagaagctgggactggagttaattgcatctgagaactttgcgagccgagcggtc
ctggaggccctgggatcctgcatgaacaacaaatactctgagggttacccaggacagagg
tactacggtgggacagagtttgtggatgagctggaaaggctgtgccagaagcgagccctg
caggcctaccggctygacccccagaagtggggtgtcaacgtccagccctactcagggtct
cccgcaaactttgcggtgtacacrgccctggtggaaccccacggcaggattatggggctg
gacctgcctgatggtggccacctcacccacgggttcatgacagacaagaagaagatctct
gccacctctgtcttctttgagtccatgccctacaaggtcaaccccaagaccggttacatc
gactatgaccagctggaggcraacgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcacggaacctggactacgcccgcatgcgcaagatygctgatgacaat
ggggcctatctgatggctgacatggcccacatcagcgggctggtggctgctggtgtggtg
ccctcgcccttcgactactgcgacatcgtctccaccaccacccacaagaccctgcggggc
tgcagggccgggatgatcttctaccgcaaaggcacccgcagtgtggaccccaagacagga
aaggagactgtctacaacctggagagcctcatcaaccaggcagtgttcccagggctgcag
ggaggcccacacaaccacgccattgcagggatcgctgtggcactgcagcaggccatgaca
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcgctgtcgacagca
ctgatggagatgggctatgacattgtcacagggggctctgacaaccacctgatcctcgtg
gacctgcgcagcaaaggcacrgatggcagccgggccgagcgggtgctggagctctgctcc
atcgcctgcaacaagaacacgtgccctggtgatgtcagygccctgcgccccagcggcctc
cggttcgggacaccggctctcacctcccgtggcttccggcaggacgatttccgaaaggtg
gcccagtacatccacagagggatcgagctgacactacgtgtgcagaaggacatgagcccc
aaggccacgctgaaggaattcaaggacaaactggaggagccaaaataccgtggggagctg
aaggcactgaaggaygaggtagaagccttcgcagccaccttcccgctcccagggctgcct
gtcctgtaa
DBGET
integrated database retrieval system
