Malurus melanocephalus (red-backed fairy wren): 130582684
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Entry
130582684 CDS
T09178
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03030
DNA replication
mmea03420
Nucleotide excision repair
mmea03430
Mismatch repair
mmea03440
Homologous recombination
mmea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130582684 (RPA1)
03420 Nucleotide excision repair
130582684 (RPA1)
03430 Mismatch repair
130582684 (RPA1)
03440 Homologous recombination
130582684 (RPA1)
03460 Fanconi anemia pathway
130582684 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130582684 (RPA1)
03032 DNA replication proteins [BR:
mmea03032
]
130582684 (RPA1)
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130582684 (RPA1)
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130582684 (RPA1)
DNA replication proteins [BR:
mmea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130582684 (RPA1)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130582684 (RPA1)
MMR (mismatch excision repair)
130582684 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
130582684 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
DUF4939
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
130582684
NCBI-ProteinID:
XP_057237533
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSXQLSEGAIRAIMQGEDVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNALVEDERLSARCICQVNRFIVNSLKDGRRVVILMDLTVLQTADQVGGTIGNPQPYNEG
QQRSAAPAGNPAPSKPQQQNGNFSAAGPAAPKYHAPSNQFGKVSAPSALKTPGGSQAKVV
PIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKF
FPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVSI
SDLENTPKDAIVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGNEA
EQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECT
SISDVRGGPTAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCLYQACPSSD
CNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQESAEFILGHNAA
FLGELKEKNEQAFEEVFQNANFNTYEFRIRLKLETYNDESRIKATAMDVKAVNYREYSKR
LIANIRKNAQLG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagckcgcagctgagcgagggggccataagggccataatgcagggagaggacgtctcc
aagcccgtgcttcaagtcatcaatacacgggccattgctacaggaactgggcccccacgt
taccgagtgctgatgagtgacggggtgaacaccctttcctctttcatgttggcaacacag
ctgaacgccctggtggaggatgaacgcctctcagcccggtgtatttgccaggtgaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatcctgatggatttaactgtc
ctgcaaactgctgatcaggttggtggcactattggcaatccccagccatacaatgaaggg
cagcaacgttctgcagctccagcaggaaacccagcacccagcaagccacagcaacaaaat
ggcaatttctctgcagcaggtcctgctgctcccaagtaccacgctccctccaaccagttt
ggaaaagtgagcgctcccagtgccctgaagacaccaggggggtcccaggccaaagtggtg
ccgattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgttacccaa
aaaggccagatccgcacgtggagcaactcccgtggtgaaggaaagctcttttccatagag
ctggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaagttc
tttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaagactgct
aacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagacttca
gttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatccatc
tctgacttggagaacacgcccaaagacgccattgttgatgtaattggaatttgcaagagc
tacgaagatgtcactaaaattatagtgaaagctaacaatagagaggtttcaaagaggaac
gtgcatctgatggatacatcagggaaactggtgacagctacgctatggggaaatgaggct
gaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgtgtctctgac
tttggtggcagaagcctgtctgtcctgtcctccagcacagttgtcatcaacccygatagc
ccagaggcttttaagctccgaggatggtttgactctgaggggcagcttctggaatgtact
tccatctctgatgtgaggggtgggccaacagctggagcaaataccaattggaaaactttg
tttgaagccaaatctgagaacttgggacaaggagataaggcagattattttagctgtgtg
ggcacaattgtacatctgcgcaaggagaactgcctgtaccaggcatgtccctcttcggat
tgcaacaagaaagtgatagaccagcaaaacggactttaccgctgtgagaagtgtgaccgc
gagttccccaacttcaaataccgcctgatgctcctggtgaccattgcagactgtctggaa
tatcagtgggtgacttgttttcaagagtcagcagaattcattcttgggcacaatgcagct
ttcctgggagaactgaaggaaaagaacgagcaggcttttgaagaagtgttccaaaatgca
aacttcaacacgtacgagttcaggatccgattgaaactggagacttacaacgacgaatct
cgtattaaggccacagcgatggacgtcaaagccgtgaactacagagaatacagcaagagg
ttgattgccaacatcaggaaaaacgctcagctggggtga
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integrated database retrieval system
