Malurus melanocephalus (red-backed fairy wren): 130582700
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Entry
130582700 CDS
T09178
Symbol
PRPF8
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130582700 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmea03041
]
130582700 (PRPF8)
Spliceosome [BR:
mmea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
130582700 (PRPF8)
Complex C
U5 SnRNP specific factors
130582700 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
130582700
NCBI-ProteinID:
XP_057237553
LinkDB
All DBs
Position
Unknown
AA seq
2342 aa
AA seq
DB search
MAAVFPYRGGCAPVPNPMAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDWHPXLYSMSQLADGLQYIFAHVGQLTGMYR
YKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLG
NLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHL
SEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCK
KNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYK
HDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE
VGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVY
KWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKN
NVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLS
FQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKC
WPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFE
CRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGS
TTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP
VVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQ
PWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD
KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGT
YFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV
QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKET
IHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDS
HDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKI
MKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKT
FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP
VEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQ
MVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTD
EEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQT
KEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVS
SDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGT
HQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTII
ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMV
PAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDL
YA
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgttcccgtaccgcggcggctgcgccccggtgcccaacccgatggcgccg
ctgccygactacatgtccgaggagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgcggagaagaggaaattcgggttcgtggacgcgcagaaggaggac
atgccccccgagcatgtccgcaaaatcatccgtgaccacggcgacatgaccaacagaaag
ttccggcacgacaagcgcgtttacctgggtgctctgaagtacatgcctcatgcygtgctg
aagctgctggagaacatgcccatgccctgggagcagatccgagatgttcccgtcctgtac
cacatcaccggtgccatctcctttgtcaacgagatcccctgggtcatcgagcctgtctac
attgcccagtggggctccatgtggattatgatgaggcgggagaagagggacaggcgtcac
ttcaagaggatgagattccccccgtttgatgatgaggaaccccctctggattatgctgat
aacatcctggatgtggagcctctggaagctattcagctggagctggatccagaggaggat
gcccctgtgctggactggttctatgaccaccagcctctgaaggayaacaggaaatatgtc
aacggctccacgtaccagcgctggcagttcactctccccatgatgtccactctgtaccgc
ctggccaaccarctgctcactgayctggtggatgacaactacttctacctgtttgacctg
aaagccttcttcacctccaaggcactgaacatggccattcctggaggtcccaagtttgag
cctcttgttagagacatcaaccttcaggatgaagactggaatgaatttaatgacatcaac
aaaatcatcatcaggcagcccatcaggacmgagtacaaaatcgctttcccgtacctgtac
aacaacctgccacaccatgtccacctcacctggtatcatactccaaacgtcgttttcatt
aaaacagaagatccygacctaccagctttttactttgatcccctgatcaaccccatttca
cacaggcattctgtcaagagccaggagcctctgcctgacgacgatgaagagtttgagctg
ccagagtttgtggaacctttcctgaaggataccccactgtacactgataacacagccaat
ggcattgccctgctgtgggccccacgacccttcaacctgaggtctggcaggaccaggaga
gctcttgacatccccctggtcaagaactggtaccgcgagcactgcccrgcaggacagcca
gtcaaagtgagagtttcctaccagaagctcctgaagtactacgtcctgaatgcactcaaa
cacagacctcccaaggcccagaagaagagataccttttccgctccttcaaggctaccaag
ttcttccaatcgaccaagctggactgggtggaagttggcctgcaggtgtgtcgccagggg
tacaatatgctgaacctgctgatccacagaaagaacctcaattaccttcacttggattat
aacttcaacctgaagcctgtgaagaccctcaccacaaaggaaagaaaaaaatcccgtttt
ggaaatgctttccatctgtgccgagaagtgctgcggctgactaagctggtggtggacagc
catgtccagtacagactgggaaatgttgattggcatccctgactgtattccatgtctcag
ctggcagatggcctgcagtacatctttgcccacgtgggtcagctcacggggatgtaccgg
tacaaatacaaactgatgaggcagattcgtatgtgcaaggacctgaaacatctcatctac
tacagatttaacacrgggcctgtgggcaaaggtcctggctgtggtttctgggctccaggc
tggagagtgtggctgttcttcatgaggggcatcaccccgctgctggaacgctggctgggg
aatctgctggccaggcagtttgaaggccgtcactcgaagggtgtmgcaaagaccgtcacg
aagcagcgcgtggagtctcactttgacctggagctcagggcagctgtgatgcaygacatc
ctggacatgatgccagaaggaatcaaacagaacaaagccagaaccatcctgcagcacctc
agcgaggcttggcggtgctggaaggccaatattccctggaaggtgccagggctgccgact
cctattgagaacatgatcctgaggtatgtgaaggccaaagctgactggtggacaaacaca
gctcactacaaccgggagcgsatccgccggggagccactgtcgacaaaaccgtctgtaag
aagaacctgggcaggctgaccagactctacctgaaagctgagcaggaacggcagcataat
tacctgaaggatgggccgtacatcactgcagaagaggctgttgctgtgtacacaaccaca
gtgcactggctggagagcaggaggttctcccccatacctttccctccactgtcctacaag
catgacaccaagttgctgatcttggccctggagaggctgaaggaagcttacagtgtgaag
tcacgcctgaatcagtcacagagagaggagctgggcttgattgagcaggcttatgataat
ccccacgaagctctgtccagaatcaagcgacatctgttgactcagagagccttcaaggag
gttggcattgaattcatggatctctacagccatttggtccctgtttatgatgttgagccc
ttggagaagatcacagatgcttatctggatcaatacttgtggtatgaggctgataagcga
agactcttcccaccttggatcaaacctgcygacactgagccacccccactgctggtgtac
aagtggtgccaaggcattaataacctgcaggatgtttgggaaaccagtgaaggggartgc
aacgtgatgctggaatctcggtttgagaagatgtatgagaagattgacctgaccttgctc
aacaggctgctgcgtctcattgtggatcacaacattgctgactacatgacagccaagaac
aacgtggtgatcaactacaaggacatgaatcacacaaactcctacgggattattcgtggg
ctgcagtttgcttccttcattgtccagtactatgggcttgtgatggacctgctggtgctg
ggcctgcaccgggccagtgaaatggctgggcctccccagatgccaaatgacttcctcagy
ttccaggacattgccacggaggtggcccatcccattcgcctcttctgcagatacattgac
aggattcacatcttcttcaggtttacagctgacgaggcaagagacctgattcagcggtac
ctgacagagcaccccgaccccaacaatgagaacattgtgggctacaacaacaagaagtgc
tggccccgggatgctcggatgcgcctcatgaagcacgacgtgaaccttggccgtgccgtg
ttctgggatatcaagaaccgtttgccccgctcggtgaccacggtgcagtgggagaacagc
ttcgtgtccgtgtacagcaaagacaaccccaacctgctgttcaacatgtgcggcttcgag
tgccgyatcctgcccaagtgccgcaccagctacgaggagttcacccacaaggacggsgtg
tggaacctgcagaatgaggtcaccaaggagcgcacagctcagtgcttcctgcgtgtggat
gatgagtctatgcagaggttccacaacagagtgaggcagatcctcatggcctctggctcc
acaaccttcactaagattgtcaataaatggaacactgctctgattggcttgatgacatat
ttccgggaagctgtygtgaatactcaggagctgcttgatttgctggtgaagtgtgagaat
aaaatccagactcggatcaaaatcggcctgaattccaaaatgcccagycgttttcctcct
gtggtgttctacacccctaaggagctgggggggctgggcatgctctccatgggccacgtt
ctcatccctcagtctgatctgaggtggtccaagcagacagatgttggcatcactcacttc
cgctcaggaatgagtcacgaggaggaccagctcatcccaaatctgtatcgttacatccag
ccctgggagagtgaattcattgactcccagagggtgtgggcagagtatgccctgaaacgg
caggaggcratagcccagaacaggcgtctgacactggaggatctggaggactcctgggac
aggggaattcctcgcattaacacccttttccagaaggaccggcataccctggcttatgat
aaaggatggagagtcaggactgacttcaaacagtatcaggtgctgaagcagaacccgttc
tggtggacacaccagcgccacgatggcaaactctggaacctgaacaattaccgcacggac
atgatccaggctctgggtggggtggaaggcatcctggagcacactctcttcaagggcact
tacttccccacrtgggaaggtctcttctgggagaaggcyagtggctttgaggagtccatg
aagtggaagaagctgacaaatgcccagagatcgggtttgaaccaaattccaaacagaaga
ttcactctctggtggtcccctaccattaacagagccaatgtgtatgttgggttccaggtg
cagctggatttgacagggatcttcatgcacggcaagatccccackctgaagatttccctc
atccagattttccgagctcacttgtggcagaagatccatgagagcattgtcatggatttg
tgtcaggtgtttgatcaagagctggatgccctggagattgagacagtgcagaaagagacc
atccatcccaggaagtcctacaagatgaattcctcgtgtgcagatatccttctctttgct
tcctacaagtggaatgtgtcacgtccatcacttctggcagattccaaggatgtgatggac
agcaccaccacccagaagtactggatagacatccagctgcgctggggggactacgattcc
catgacatcgagcgctacgcgagggccaagttcctggactacaccacggacaacatgagt
atctacccctctcccactggggtgctcattgccattgatctggcctacaacttgcacagt
gcttatggaaactggttccctggaagcaaacctctgatccagcaggccatggccaaaatc
atgaaagccaaccctgccctgtatgtgttgagggaacgaatccgcaaaggactgcagctc
tactcctcagagcccacggagccctacctgtcctcccagaactatggggagctcttctcc
aaccagatcatctggtttgtggatgacaccaatgtgtacagagtcaccatccacaagact
tttgaagggaatttgaccacaaaacccatcaacggagccattttcatcttcaatcccaga
actggacagctcttcctgaagatcatccacacgtctgtgtgggcaggacagaarcgtctg
ggacagctggccaagtggaagactgctgaagaagtggctgccttgatccgctcccttccc
gtggaggagcagccaaagcagatcatagtgacacggaagggcatgttggacccgcttgag
gtgcacttgctggatttccccaatattgtgatcaaaggctcggagctacagytgcccttc
caggcctgtctgaaagtggagaagtttggtgatctcatcctgaaggccacagagccccag
atggttctgttcaatctctatgatgactggctgaaaaccatctcttcctacacggcattc
tcccgtctgatcctgattctccgggcactacacgtgaataacgatcgagccaaagttatc
ctgaagccagacaagacaaccatcactgagcctcaccacatctggccaaccctgaccgat
gaggagtggatcaaggtggaggtgcagctgaaggatctcatccttgctgactatggcaag
aagaacaacgtgaacgttgcatccctgacccagtcagagatccgagacatcatcctgggc
atggagatctccgccccatctcagcagaggcagcagattgcagaaatygagaagcaaacc
aaggagcagtcgcagctgacagccacacagacccgcacggtgaacaaacacggggatgaa
atcatcacctccaccaccagcaactatgaaacccagaccttctcctccaagactgagtgg
agggtcagagcaatttctgctgccaacctccacctgcggacaaaccacatctacgtctca
tcagatgacataaaggagacaggttacacctacatycttcccaaaaatgtgttgaagaag
ttcatctgcatttcagacctgcgggcccagattgcaggttacctgtacggagtgagccct
ccagacaacccccaggtgaaggagatccggtgcattgtgatggtgcctcagtgggggaca
caccagaccgtgcacctcccagggcagctgccacagcatgagtatctcaaggaaatggaa
cctctgggatggattcacacccaaccaaacgagtcccctcagctctcaccacaggatgtc
accacccacgccaaggtcatggctgacaacccctcttgggatggagagaagaccatcatc
atcacctgcagcttcacccctggctcctgcacgttgacagcctacaaactgaccccaagc
gggtacgagtggggccggcagaacacagayaaaggcaacaatcccaagggttacctcccc
tcccactatgagagggtgcagatgctcctgtccgaccgcttcctcggcttcttcatggtc
ccagcacagggctcctggaactacaacttcatgggtgtccgccacgaccccaacatgaag
tacgagctgcagctcgccaaccccaaggagttttaccacgaggtccatcgcccctctcac
ttcctcaacttcgcgctgctgcaggagggggaggtttactcggccgaccgcgaggatctc
tacgcctga
DBGET
integrated database retrieval system
