Malurus melanocephalus (red-backed fairy wren): 130583063
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Entry
130583063 CDS
T09178
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130583063 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130583063 (EXOSC10)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130583063 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
CX9C
Motif
Other DBs
NCBI-GeneID:
130583063
NCBI-ProteinID:
XP_057238142
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MAAAGREGSPAGRAGSSGTPVDAGTSSAMSTLPGFDSPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYCSFPGFRAYCNTQGDRLLHCMSQVMQYHGCRSLMKDSNKVTGLEDKFDMLV
DSNDIILERVSILLDEASGVNRNQQPVLPAGLQPPQMIVSSWNRKAGEFHKRAQSETFRL
LHAKNISRPQLKFREKVDNSNTPFVPKIFIKPNALKPLPEALTKSGRERKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDEVLKKPELQMYRPIEETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSNMNILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCSVDA
DKKYQLADWRIRPLPEEMIRYARDDTHYLLYIYDKVRESLWERGNEQPTQLQVVWQRSRD
ICLKKYIKPLFTDESYLDLYRRQKKHLDTQQLTAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKIAEELPKESQGIIACCNPVPPLVRQQINELHMLIKQAREMPLVKSEVILAVKKRAP
LPNPEKLENALFGPHDSSRIPMDHYQNNSALDPAPVLEDACLFSDSERTMDIQDSQPEST
CLVATATVSIFNECDENEGNKRILTSAQRKAQLIMESFENPFKMYLPPEENSAYVSQSAK
FDPSSKIYEISNRWKLMNQAPVQKKSKNETNXKATQQSVAHVQTQKLHKKAAQSIVSVRQ
QAMQEQANRKREREASEKGAETVAELPTQEKKRQKIPQQXEELEGPRQLTPFDYSNSNFK
VFAGSSKSKESPQFDPAKQAYTGKKFAGANKLQQSGNQSMSYLSGKAERGSTHHWPKR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccggccgtgaggggagcccggcagggcgggcgggcagctccggcacgccc
gtggacgctgggacaagcagcgcgatgtcgacgctgcccggattcgatagcccggacgcc
ttcgtcaagtatgctctcggcacagtggtggctgcaacaaaggcatctaacgggctcccc
cagcctggtgatgagtatgatttctactgcagcttccccggcttccgcgcatactgcaac
acgcagggcgaccgcctgctccactgcatgagccaggtgatgcagtaccatggctgccgg
agcctcatgaaggattccaacaaagtgacagggctggaagataaatttgatatgctggtt
gactccaatgacatcattcttgaaagagtgagtattttattggatgaagcatcaggagtg
aacagaaaccagcagccagtcctgccagctgggttacagcccccacagatgatcgtttcc
agctggaaccgtaaggcaggagaattccacaagagagctcaatctgaaacgttccgattg
cttcatgccaagaatatttctcgaccacagcttaagtttcgtgaaaaggttgacaattcc
aacacgccctttgtacctaaaatttttatcaagccaaatgctttgaagcctttgcctgaa
gccctcacaaaaagtggacgggagcgaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcarcagaggacgcagaaaactgagcaagacatgtttgct
cacccttaccagtatgaactagagcatttttctccaccagatgaagttctcaagaagcct
gaactccagatgtacaggcccattgaggaaacaccctgtcattttatcaccacactggay
gagttggtagaactaaatgaaaagcttatgacttgtaaagaatttgccttggacttagag
caccattcctacaggagtttccttggcttgacatgtctgatgcagatttccacccgaaca
gaagacttcattattgatacattggaactgcgcagtaacatgaacatcctcaatgagacc
ttcacagaccctgcaattgtgaaggtacttcatggtgctgattcagatgtggaatggctg
cagagagactttggtctstacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaatcttggcagacattcyttggaccacttgttaaagctgtattgcagtgtagatgct
gacaagaagtaccagctggctgactggaggatacgccctttgccagaagaaatgatccgg
tatgctcgtgatgacactcactacttgctctacatctatgataaagtgagggagtcrctg
tgggagagagggaacgagcaacccacacagctgcaggttgtgtggcagcgcagcagggac
atctgcctgaagaaatacatcaagcccctctttacagatgaatcctaccttgatctctac
aggaggcagaaaaaacaccttgacacccagcagctgacagcatttaggctgctttttgca
tggagagacaaaatagcacgtcaagaggatgagagcacaggatatgtgctaccaaatcat
atgctgttgaagatcgcagaggagctgcccaaagaatcccagggtatcattgcatgctgc
aaccctgtcccaccacttgttcgtcagcagattaatgaattgcacatgctcattaagcag
gcccgagagatgcctcttgtmaagtcggaggttattttggcagtcaagaagagagcacct
ctacccaaccctgagaagctggagaatgccctctttggaccacatgacagttcacggatt
cctatggatcattatcaaaataactctgccttggaccctgcaccagttttggaagatgct
tgtctcttttcagacagtgagaggacaatggatattcaagatagycagccagagtcaaca
tgtcttgttgctactgccactgtcagcatattcaatgaatgtgatgaaaacgaaggaaat
aagaggattttaaccagtgcacagcggaaagctcagctaataatggagtcctttgaaaat
ccatttaaaatgtatctacctccagaggagaattctgcctatgtctcacaatctgcaaag
tttgacccatcatcaaaaatttatgagatcagcaatcgatggaagttgatgaatcaggca
ccagtacagaagaagtccaagaatgaaacgaatmagaaagcaacccagcagtcagttgcc
catgtccagacacagaagttgcataaaaaggcagcacaaagcattgtatctgttcgtcag
caagcyatgcaggaacaagctaataggaagagggagagagaggcaagtgaaaagggagca
gaaacggtagcagagttgccaacacaagaaaagaaacggcaaaaaatcccccagcaamca
gaggagctggaaggaccgaggcagttaaccccctttgattacagcaattccaacttyaaa
gtgtttgcaggaagcagcaaatcaaaggagtcgccacaatttgatcctgccaagcaagct
tacacaggcaagaaatttgctggagctaacaaactgcaacagtctggaaaccagagcatg
tcctacctgtcggggaaagctgaaaggggctcaacacaccactggccaaagagataa
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