Malurus melanocephalus (red-backed fairy wren): 130583108
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Entry
130583108 CDS
T09178
Symbol
CCDC88A
Name
(RefSeq) girdin
KO
K25392
girdin
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmea03037
]
130583108 (CCDC88A)
Cilium and associated proteins [BR:
mmea03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130583108 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
HOOK
GAS
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
130583108
NCBI-ProteinID:
XP_057238212
LinkDB
All DBs
Position
Unknown
AA seq
1885 aa
AA seq
DB search
MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVYLNEVMLQINPKSA
NQRINKKVNNDASLRIQNLSILVKQIKTYYQETLQQLIMMSLPNVLIIGKNPFSEPGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDTRAAVAAHIQEVTHNQENVFDLQWMDVIV
LTQEYVEPLLKNMALHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMESELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLRTVEELQS
AVDSVEGSSSRILKMEKENQRLSKKLEELENEISQEKQSVQNSQNQNKDLMKEKAQLEKT
LEALRENSERQIKLLEQENEHLNQTVTSLRQRSQISAEARMKEIEKENKILHESIKETSS
KLNKIEFEKKQIRKELEHYKEKGERAEELENELHRLEKENELLQKKITNLKITCEKIEAL
EQENSDLETENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA
QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNVKISNLERENKSLFKEIVVYKESCLRLKELEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDSRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSP
PRSGEENPSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQVKQLETQSN
NLQAQILTLQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALEN
ENECVLKEREDLKALYEALLKDHERLEQLHERQAAEYESLIAKHGSLKSAHKNLEVEHKD
LEDRYNQLLKQKGQLEELEKVLKTEQDKMLQQSEKHETVAAEXKKLRDENERLTHTYSQL
LKENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDGNRERLKSVTLTPTRSESSEGFLQLPHQ
DSQDSSSVGSNSLEDGQTLGTKKSSMGALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ
SMVLAGGQWTGSSEHLEGPDDISTGKRRKELGAMAFSTTAINFATVNSSTGFRSKQLLNN
KDTTSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNSQS
RPQSHSSGEFSLLHEHEAWSSSSSSPIQYLKGHTRSSPVLQHRMSETLESRGRQIKMGSP
GSEVVTLQQFLEESNKSNSNEIKSASEENLLDEVMRSLSESAELAGREKLRKQPAAGCGI
VRSLSVRNTVDFSDGRSLKPEQLVRPSLRKSEDLYFSSSPIKLTPGAQGKNRSVKEKIQA
SVTQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDSRPPVSVDAXLAPADRSA
PPTSNVEAIPESRNSKSRSREQQSS
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagatcttcacaccccttctggagcagttcatgtcgagccctcttgtcacc
tgggtaaagacattcggaccgctagctggaggaaatgggaccaacctggaggaatatgtg
gcgctggtggatggagtgtatttgaacgaagtcatgctgcaaatcaatccaaagtctgct
aatcagaggataaacaaaaaagtaaacaatgatgcatcattaaggatccaaaatttgtct
attttggtgaaacaaataaaaacttactatcaggagactttgcaacagttgatcatgatg
tctttgccaaatgtgctgataattggcaaaaaccctttttctgaaccaggtactgaagaa
gtaaaaaagctcctcctgcttttgctgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaatccaaagtctggattttgataccagagcagctgttgcagcccacatt
caggaggtaactcataatcaggaaaatgtgtttgacctgcagtggatggatgtcattgtg
ctgacgcaagagtatgttgaacctctcctgaaaaatatggcattacatttaaaaagactt
atagatgaaagagatgagcactcagagaccatcattgagctgtcagaggagcgggactgt
ctccggttcctgcctcacgcgtcggcggcgcagtccccgtgcggctctcccggcatgaag
cgcaccgagagccggcagcacctgagcgtggagctcgccgatgccaaggccaagatcagg
aggctgaggcaggagcttgaggaaaagactgagcagttgcttgattgtaaacaagagctg
gagcagatggaatctgaactgaaaagacttcagcaagagaacatgaacctgctgtcggat
gcccgctctgccagggtgtacagggatgagctggatgcactccgggagaaggcgatccga
gtggacaarctggagagtgaagtcagccgctacaaggagaggctccatgacattgaattc
tacaaagccagggtggaggaattaaaggaagacaatcaagtgttgctagaaacaaagaca
atgttggaagatcaattagaggggacccgagcccgttcggataaattgcatgagttagaa
aaagagaatttacaattaaaagctaaattgcatgacatggagatggagcgtgatatggac
agaaagaagattgaggagcttatggaggaaaatatgaccctagaaatggctcagaagcag
agtatggatgaatctttgcatcttggctgggaacttgagcagattaataggactactgaa
ctttctgaagtgccccagaaatcattgggccatgaagtgaatgagctgacatccagcagg
ttactaaaactggaaatggaaaaccaaagtttgctgaggactgtggaagaactgcagagt
gcagtggactctgtggaaggcagcagttcaaggattctgaaaatggaaaaagaaaaccaa
agacttagcaagaagcttgaagagctggagaatgaaattagccaagagaaacaaagtgtt
cagaacagtcaaaatcagaataaagatttgatgaaagaaaaagcacagcttgaaaagaca
cttgaagcacttcgagagaactccgagcgacaaattaaactcttagaacaagaaaatgag
cacttgaatcaaactgtgacttctttaaggcagcgctcacagatcagtgctgaggcraga
atgaaagaaattgaaaaggaaaacaaaatcctgcatgagtctatcaaagagaccagcagt
aagttaaataagattgaatttgaaaaaaaacaaatcaggaaagaactggaacactacaaa
gagaaaggggagagggcagaagaattagagaatgagctgcatcgtctggagaaggaaaat
gagttattacagaaaaaaatcactaacctaaaaatcacttgtgagaagatcgargcctta
gaacaagagaactctgacctggagacagagaacagaaagctgaaaaaaaccttggatagc
ctaaaaaacctcacttttcaattagaatccttagaaaaggagaattcccaactcgatgaa
gaaaatttagagttacgaaggacaattgaatccttgaagtgtacaagcattaaagtggca
cagttacaattagaaaacaaggagctggagagtgaaaaggagcaacttaaaaaaagcctt
gaactcatgaaagcctctttcaagaagacggaacgcttggaagtcagttaccaaggcctg
gacacagaaaaccaaaggctacagaaagccctggaaaacagcaataagaagattcagcaa
ttagagagtgaattacaagatttagagtctgaaaatcagaccctgcagaagaacttggaa
gagttaaaaatttctagtaagcgcctggagcagttggaaaaggagaataagttgttagaa
caagagacttctcaactggaaaaggataagaagcagctggaaaaggaaaataaaaggctt
cgacaacaagcagaaattaaagatagtactttagaagaaaacaatgtaaaaattagtaat
ctggaaagggagaataaatctctgtttaaagaaattgttgtgtataaagagtcgtgtcta
cgcctgaaagaattggaaaaggaaaacaaggagctggtgaaaagagctaccattgataag
aaaaccctggtcactttgagagaggacttggtgaatgagaaattgaagactcaacagatg
aacaatgatctagaaaaacttgcccacgagcttgaaaaaataggtttgaacaaggagcgt
ctcctgcacgatgaacagagcagtgatgacagtaggtacaagcttttggagtccaaatta
gaatctacgctcaagaagtctctggaaataaaagaagaaaaaattgctgctttggaggct
cgtttagaagaatcaacaaatctgaaccagcagctgcgtcaggaactgaaaacagtgaag
aaaaactatgaagctctcaagcaaagacaagaagaggaaaggatggttcagaattcacct
ccaagaagtggagaagaaaatccatctgtcaataagtgggagaaagaaaaccaggagact
actagagaattattgaaagttaaagatagattaatcgaggtggaaagaaataatgcgacr
ctgcaggcggagaagcaggcgctgaaaacgcaggtgaagcagctcgagacacagagcaat
aacctgcaggcccagatcctgaccctgcagagacagactgtgtccctgcaggagcaaaac
acaactctgcaaactcagaatgccaagctgcaggttgagaattccacgctgaactcccaa
agcacatccctgatgaaccagaacgcccagctgctgatccagcagtcagccctggagaac
gagaacgagtgcgtgctcaaggagcgcgaggacctgaaggcgctctacgaggccctgctc
aaggaccatgagcgcctggagcagctgcacgagcgccaggcagccgagtacgagtccctc
attgccaagcacggcagcctcaaatctgcacacaaaaacttggaggtggagcacaaggac
ttggaggacaggtacaatcaattgctgaaacagaaagggcagctggaagaactggagaag
gttctcaagacagagcaggacaaaatgctgcagcaaagtgagaaacatgaaactgtggca
gcagaatrtaaaaaacttcgtgatgaaaatgaaaggctcactcacacatacagtcagctc
ctgaaggagaatgaagtgctccaaactgaccacaagaatctgaaaacattattgaacaat
tccaaactggaacaaacacgattggaagcagagttttccaaactcaaagaacagtaccag
caactggatatyacatcaacaaaactaaataatcagtgtgagctgctcagccaacttaaa
ggaaacctggaggaggaaaacagacacctgctggatcaaatccagactttaatgctgcag
aatagaacgttattggagcagaatatggaaagcaaggatctcttccatgtagagcaaagg
caatacattgacaaactaaatgaattgaggcgccagaaggagaaactggaggagaagata
atggatcagtataaattttatgagccatctccaccaagaagaaggggcaactggatcacc
ctgaagatgaggaagctgatcaagtccaagaaggacggaaatcgtgagcgcctcaagtcc
gtgacgctgacgcctacacgctccgaatccagcgagggattcctgcagctgccccatcag
gacagccaggacagctcctccgtgggctccaactccctggaggatgggcagaccctgggc
accaaaaagagtagtatgggtgcactgaaaagactgccctttttgaggaacagaccgaag
gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag
tccatggtcctggcaggaggacaatggacaggtagttctgagcatctggagggtcctgat
gatatatccacgggtaaaaggaggaaggaattgggagctatggccttctctactacagct
atcaactttgccactgtcaactcctccacaggcttcagatccaagcagttgctaaataat
aaagatactacatcctttgaagatgtaagtccacaaggtattagtgatgattctagtaca
ggatcaagagttcatgcttccagaccagccagccttgatagtggcaggacatccactagc
aatagcaataacaatgcttcactccatgaagtcaaagcaggtgcagtgaacagccagagc
aggccccagagccacagcagtggggagtttagcctgctccatgagcacgaggcctggtcc
agcagcagcagcagccccatccagtacctgaagggtcacaccaggtctagccctgtgctc
cagcacagaatgtccgagacgctggagagtcgtggcagacagatcaaaatgggctcccct
ggaagtgaagttgtcaccctgcagcagttcctggaagaaagcaacaagagtaattccaat
gagattaaatctgcaagtgaagagaatcttttagatgaagtgatgagaagcttgtctgag
tctgcggagttggcagggagggagaaactgcgaaagcagccggcagctggctgtgggatt
gtgagatccctgagtgtcagaaacacagttgatttctcagatggacgatcccttaaacca
gaacagctggtaaggcccagcctccggaagagtgaagatctctacttcagtagctctcca
atcaaactcactcctggtgcccaggggaaaaacagatccgtgaaagaaaagatccaagcg
agtgtgacccagcgacaatccagggactgcaacccttacgccaccttacctcgtgccagc
agtgtgatttccacagcagaaggaaccacccgaaggacaagcatccacgattttttgtct
aaggacagtaggccgcccgtgtccgtggatgcarccctggccccggctgacaggagtgct
ccacccacctccaatgtggaagctatcccagaaagcagaaattcaaaaagcaggtctagg
gagcaacaaagctcctaa
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integrated database retrieval system
