Malurus melanocephalus (red-backed fairy wren): 130583173
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Entry
130583173 CDS
T09178
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04110
Cell cycle
mmea04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130583173 (SMC1B)
04114 Oocyte meiosis
130583173 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmea03036
]
130583173 (SMC1B)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130583173 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
130583173 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
rve
Motif
Other DBs
NCBI-GeneID:
130583173
NCBI-ProteinID:
XP_057238326
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All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MGYLKLLVVKDFKSWRGEQLIGPFMRFNCIIGPNGSGKSNIMDAVSFVMCEKTSNLRVKS
VRELIHGAHVGRPVSSTASVKIVYCEEDGEEKTFSRVIRGSCTEFYFNDKSVSRSAYVAE
LEKVGILVKARNCLIFQGTVESIAMKKPKERTQLFEQISNSWEYAEDYERKKKKMQEAEQ
DAKFNYNKKKSVAAERKQARIEKEEAEHYQMLIKELDEERLQLQLFQJYHNEKKIXXLKN
SLEEKNMEAYMKKESLSEAEDSFKVKKKMFGILNRDQQHMEKEMKTLEASLIQQRPLYIK
AKENTSYQIKKVEMSKKSLRDKEKSCDKEKQNIKELEIELSQIEKAWRAFEQKTEEERMK
RAAEIELGESQLERYKELKEMARKKVATLAQQLEKLRWEDKGDQERLKLNRRKKNEIEET
IKQTVAQIEELEKRIEKLEEYVKICTGSLTEKTQQEEVLAKEIENAGVRMAEVNEELNKI
VDELQNAKIDYHEGKREQMRAEILESLKRLYPDSVFGRLVDLCHPVHKKYQLAVTKVFSK
YMTAIVVTTEKTARDCIRFLKQERAEPETFLALDYLDVRPINEKLREVKGAKMMVDVVQT
PFAQLKKVIQFVSGNTLICETVKEAKQTAFDGPVRLKTVALDGTLFLKSGVISGGSSDLR
SKARCWDEKEMSKMKERRDGLISELKALMKIRRKEADLKQLXAQCQGAQTRLKYSQSELD
LIKKKHLANLFMEKSKLESELVNIEAQYDMLNEGVAQRKEKIEEFQKKINKVEDDVFREF
CEEIGIENIRVYEQEHVRQQEEIDKRRLEFENQRTRLNVQLEYNRDHLQKLTNSLSKLRE
TVHKDEAEIIKLQKEEENLLKKVNERMEEQQHLKDRLSAHKSELTKSQNEVEEFRKTMLT
LNREAVKLQREATALETSLEEKRLKRHNLLLECKVQNLKIKLLLGSLDDISEVELGTETE
DTQTLSGIYEREERIQIDYSTLEVDLKELESDEEIEVYVKQMQQEIKCKEITLMKTAAPN
LRAGEKLQMARDKFQESIDAFEISKKEARICKQEFEEVKKRRYQLFSRCFEHASIAIDKI
YKKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALVFAI
HSFRPAPFFILDEIDAALDNTNIDKVSSFIREQAHEQFQMIVISLKEEFYCKADALIGVC
PEHDDIMFSQVLTLDLTEYPEAEEQXTPEKPSRSSAFE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctgaagctgctggtggtgaaggacttcaagtcgtggcgcggggagcagctt
atcggccctttcatgaggttcaactgcatcatcgggcccaatggatcaggaaaatctaac
ataatggatgctgttagctttgtgatgtgtgaaaagacatcaaatttgcgagttaaaagt
gttcgagagcttattcatggagcacatgttggaagacctgtttcttctacagctagtgta
aagatagtatattgtgaggaagatggggaagaaaaaacattttcaagagttatccgtggt
agttgtactgaattttatttcaatgacaagtctgtcagccgatctgcrtatgtagctgag
cttgaaaaagtaggcattcttgtcaaggccaggaattgccttatttttcagggaacagta
gaatcaattgcaatgaagaagccaaaggagagaactcaactttttgaacaaatcagtaat
tcatgggaatatgctgaagactatgagcgaaaaaagaagaaaatgcaggaagcagaacaa
gatgcaaagtttaattataacaagaaaaaaagtgtggcagcagagcgcaaacaagcaagr
atagaaaaagaggaggcagagcattaccagatgctaatcaaggaactggatgaagaaagg
ctacagctgcagctttttcagmtttatcacaatgaaaaaaaaatagwttktctgaaaaac
agtttggaggaaaagaatatggaggcttatatgaagaaagagtctctttctgaagcagaa
gattcatttaaggtcaagaaaaaaatgtttgggatactaaacagggaccagcagcatatg
gaaaaagaaatgaagactctggaagcatcactgattcaacagagacccctctatataaaa
gcaaaggagaacacatcctaccaaatcaagaaagtagaaatgtctaaaaaatctctaagg
gacaargagaaatcctgtgataaggaaaagcagaacataaaagaactagagatagaattg
agtcagattgagaaggcatggagagcatttgagcagaaaactgaagaagagagaatgaag
agagcagcagagattgagctgggagaaagtcagctagagcgttacaaagagctgaaggaa
atggcaagaaagaaagtagcaacactagcccagcagctagaaaagcttcgttgggaggat
aaaggagatcaagaaaggttaaaacttaatcggcggaagaaaaatgaaattgaggaaacc
ataaaacagactgtggcacagatagaagagcttgaaaaacgcatagagaagttggaagaa
tatgtaaaaatatgcactggatcattaacagaaaaaacccagcaggaggaagtgctggct
aaggaaattgagaatgcaggagtacgaatggctgaagtgaatgaagagttgaacaaaata
gttgatgaactgcagaatgccaaaatcgactaccatgaaggaaagcgtgagcagatgaga
gcagagatcctggaaagtctcaaaaggctatatccagattctgtgtttggaagattggtt
gacctgtgtcatcctgttcataaaaaataccagcttgctgttaccaaggtattcagcaag
tacatgactgctattgttgttaccactgagaaaacagcaagagattgcattcggttctta
aaacaagagcgagctgaacctgaaacttttcttgctttggattaccttgatgttagacca
attaacgagaaattgagggaggtcaaaggagctaaaatgatggtggatgttgtacaaaca
ccatttgcacaactgaaaaaagtgattcagttcgtgagtggaaataccttgatctgtgaa
acagttaaagaagcaaaacaaactgcatttgatggaccagtgagactgaaaacagtggct
cttgatggaactttatttttaaaatctggagtgatttctggaggatcaagtgatttaaga
tctaaagctagatgttgggatgagaaagaaatgagtaaaatgaaagaaagaagagatggc
ttgattagtgagttaaaggccctaatgaagatcagacggaaggaggctgacttgaagcaa
ttgcrtgctcaatgccaaggagctcagacacgactcaaatattcacagagtgaattagac
cttattaaaaagaaacatcttgctaatctcttcatggaaaaatcaaaactggaaagtgaa
ctggtaaatattgaggctcagtatgatatgctgaatgaaggagtagcacaaagaaaagaa
aaaatagaagaatttcagaaaaaaattaacaaggttgaagatgatgtgttccgggaattc
tgtgaagaaattggaatagaaaatattcgtgtgtatgaacaagaacatgtgagacaacag
gaggagattgataagagaagactggagtttgaaaaccagaggacacgactgaatgttcag
ctggagtataatcgggatcatctacaaaaattaacaaactcactcagcaagttgagggag
acagttcataaagatgaagctgagattatcaaactacagaaggaagaggaaaatcttcta
aaaaaagtgaatgaacgtatggaggagcagcaacaccttaaggatagattaagtgctcat
aaatctgagcttacaaaaagccaaaatgaagttgaagagttcagaaagacgatgttaact
cttaatagagaagctgtaaagttgcagagrgaagccacagctctagaaacytctctggaa
gagaagagattaaaacgacataatctgctgcttgaatgcaaggtgcagaacctgaaaatc
aagttactgttaggatccctggatgacatcagygaagtagagctaggaactgaaacagaa
gacacccagactctatcagggatctatgaaagggaagagagaattcagatagactacagc
accctagaagtagacttaaaggaactagaatctgatgaagagatagaggtttatgtgaag
caaatgcagcaggaaatcaaatgtaaagagatcacattaatgaagacagctgctccaaac
ctgagagcaggagagaaattacagatggctcgggacaagttccaagaatcaatagatgct
tttgagatcagcaaaaaggaggccagaatatgcaagcaggaatttgaagaggtgaaaaaa
aggagataccagctgtttagccggtgctttgagcatgcctccattgccattgacaagatc
tataagaagctttgcaggaacagcagtgctcaggcattccttagtcctgaaaatcctgag
gagccctatctggaaggcattggcttcaactgtgtggctccgggcaagcgcttcatgcca
atggacagtttgtcaggaggggaaaagacagtggcagccctggctcttgtgtttgccatc
cacagctttcggccagctcctttttttattttggatgagatagatgctgcgctggacaat
acaaacattgataaagtctcgagtttcattagagagcaggcacacgaacagttccaaatg
atagttatttccctgaaggaagagttttactgcaaggcggatgcattgatcggagtgtgt
cctgagcacgatgatatcatgttcagccaagtgctgaccctggatcttaccgagtaccca
gaggcagaggagcaggasacaccagagaagcccagccgttcttctgccttcgaatag
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