Malurus melanocephalus (red-backed fairy wren): 130583558
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Entry
130583558 CDS
T09178
Name
(RefSeq) retinoic acid receptor RXR-gamma-like
KO
K08526
retinoid X receptor gamma
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03320
PPAR signaling pathway
mmea04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130583558
03320 PPAR signaling pathway
130583558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130583558
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmea03310
]
130583558
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130583558
Nuclear receptors [BR:
mmea03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130583558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
130583558
NCBI-ProteinID:
XP_057238988
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MVECAGGTGRRLEMQPGMQXPYSLETGSFPHFYSPVHXSSTSVSLSSGLSTGNPVEGPHS
YLEAPANPTRALPSPMNAIGSPVNSLGSPYRVIASSLGSHPVALSSAPGMNFVTHASPQL
NVLNNVSSSEDVKPLPGLPGIGNMNYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCK
GFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREGTTGLGEGMGLEG
FSFIQDLSGPLVHSEKLDMDSSRVFWTSLGKGNENRSLGWKRLLRSRPTTMTNDPVTNIC
HAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATG
LHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEV
ESLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDT
FLMEMLETPLQVT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggttgagtgtgctggagggacaggacgcaggttggaaatgcagccgggcatgcaggst
ccttattccctggagacgggatccttccctcacttctattcccccgtgcacrccagctcc
acgtcggtgagcctgtcctcaggcctttccacagggaatcccgtggaggggccccacagc
tacctcgaggcccctgccaaccccacacgggcactgccgtcccccatgaacgccatcggc
tccccggtgaacagcctgggctcaccctacagggtcatcgcctcctcgctgggctcgcac
cccgtcgctctgtcctcggccccgggcatgaatttcgtgacgcacgccagtccacagctc
aatgtcctgaacaatgtcagcagctcggaggatgtcaagcccctgccgggtctcccgggg
atcgggaacatgaattatccatctacaagtccgggatccctagccaaacacatctgtgcc
atctgtggggacaggtcctcagggaagcactacggggtgtacagctgtgagggctgcaaa
ggcttcttcaagaggacgatccgcaaggatctgatctacacgtgccgggacaacaaggac
tgcctgatcgacaagcgccaacgcaaccgctgccagtactgccgctatcagaagtgcctg
gccatgggaatgaagagggaaggtaccactgggctgggggaaggaatgggcttggaggga
ttttccttcattcaggatcttagtggccctctggtgcattctgaaaagctggacatggat
agctccagggtgttttggacctcgttaggtaaaggaaatgagaatcgtagtttaggctgg
aaaagacttttaagatcaagaccaaccactatgacaaatgaccctgtcacaaacatctgc
cacgcagctgacaagcagctcttcactctcgtcgagtgggccaagcgcatcccycacttc
tctgacctgacgctggaagaccaagtcattctcctccgtgcaggctggaacgagctgctc
attgcctctttctcccatcgctccgtgtcggtccaggatgggatcctgctggccacgggg
ctgcacgtgcaccgcagcagtgcccacagtgccggggtgggctccatctttgacagggtt
ttgacagagctggtgtcaaaaatgaaggacatgcagatggacaagtcggagctggggtgc
ctgcgagccattgtcttgtttaacccagatgccaagggtttrtccagcccctcggaagtg
gaatcgctgcgggagaaggtctatgccacgctggaagcctacacgaagcagaagtacccc
gagcagccagggcggtttgccaagctcctgctgcgtctgccggcgctgcggtccatcggg
ctgaagtgcctggagcacctcttcttcttcaagctcattggagacacccccatcgacacc
ttcctcatggagatgctggagacacccctgcaggtcacttga
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