Malurus melanocephalus (red-backed fairy wren): 130583998
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Entry
130583998 CDS
T09178
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03440
Homologous recombination
mmea03450
Non-homologous end-joining
mmea04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130583998 (RAD50)
03450 Non-homologous end-joining
130583998 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
130583998 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmea03032
]
130583998 (RAD50)
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130583998 (RAD50)
DNA replication proteins [BR:
mmea03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
130583998 (RAD50)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
130583998 (RAD50)
BRCA1-C complex
130583998 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
130583998 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
NPV_P10
DUF2703
KH_PARP14_1
AAA_13
Motif
Other DBs
NCBI-GeneID:
130583998
NCBI-ProteinID:
XP_057239713
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSSIDKMSILGVRSFGIEDKDKQVITFFNPLTILVGPNGAGKTTIIECLKYVTTGDFPPG
TKGKTFVHDPKVAHETDVRAQIRLQFRAINGEHLAVQRSMACTQKGKTPEFKTLESVITR
TKHGEKVSLSSKCAEIDREMISALGVSKAVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALEALRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLTASKEN
VKSIESQLEPLKSSLAAVEQNLTKVMRLDNDVKALESRKRQMEKDNHDLQQKMEKVFQGT
DEQLRDRYQNHQRIVKEKEKRLLDYKRDLDRATKECQRYNSEKSELLIERGRLQLQADRH
QEHIMTRDSLIQSLAAQLEFDGFERAPFTESHIXSFHRLVKERQDRDTEAASRMMREFAQ
KEAMKQKQIDEIRDQKTGLERTIDLKSDIQNKKQAELKNVKSELQQLEGFSDRVSELDEE
IGKTEHELQKAERNSNVETLEREVQTLQNEKINLDKALRRLDQEMEQLNLHTTTITQMEM
LKKDKAEKEDQIRKVKSRHSEELTSLLGYFPNKKQLEDWLHGKNKKINQTRDTLANLNKR
LASVEYDKTYASNELRKKEDQLSNHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEEKQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVLELQDKEIPDLRNQIQNANRDLTSLKGEIEEYESLLQIALS
EEEGAKACLQDITLMERYQTDIRDLERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHLWD
TVTGKIELKQKLKQDQQSQIQQLKSAVNELKAEKLQIVSSMQRRRQLEEQTVELTTEVRS
LCREIKEAKEQVLPLDAMLDKLQQEKEDLVNKRTASNKETQEKMNAMNEKVKDINKYVKE
IENYIQQGKEDYKKQKESELGEVSSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIKQLMKEMGEMKVPQMKNEQKRLEEKIESLKRNHHVALGRQRG
FEEEIVRXRKELREPQFKDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSIYRGQDIEYIEIRSDADENVSATDKRRNYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALMEIIKSRSHQR
NFQLLVITHDEDFVELLGRSEYVESFYRINKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcattgacaaaatgagtattcttggagtgaggagttttggcatagaggataaa
gacaagcaagttatcactttctttaatccattaactattttggtggggccaaatggtgcr
ggaaaaacgactatcattgaatgtcttaaatatgtaaccactggagattttcctccyggc
accaaaggaaaaacatttgttcatgatccaaaggttgcccatgaaacagacgttagagct
cagattcgattacagtttcgagctatcaatggggagcacttagctgttcagcgctccatg
gcctgtacccagaaaggcaagactccagagtttaaaacactggaatctgtcattactaga
acaaagcatggtgagaaagtcagtctgagttccaagtgtgccgaaatagatcgggagatg
atcagcgcccttggtgtttccaaagctgtgcttaacaatgtcattttctgccatcaagaa
gaatccaactggccattaagcgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatatcaaagcactcgaagctctgcgtcaggtacgactgaaacaaagc
ctgaaagtaaaagagtgtcagacagaactgaaatatctaaaacagaataaagagaaagca
caggaaatccaggatcatcttagcaacagagaggctcaactgactgcttctaaggagaat
gtaaaatcaattgagagccagcttgagcctctgaagagctctctggcagcagttgaacag
aatctcacaaaagtaatgaggttggacaatgatgtgaaggccctcgagagcaggaagcga
cagatggaaaaagataatcatgatttgcaacagaagatggaaaaggtktttcaaggaaca
gatgaacaactaagggatagataccagaaccaccagagaatagtgaaggagaaggaaaag
agactgttggactataagcgtgacctagatagagccactaaagagtgccagagatataac
agtgagaaatcagagctgcttattgaacgagggcgtcttcagctgcaggcagatcgtcac
caagagcacatmatgaccagggattccctaattcagtctctggcagcacagctggaattc
gatgggtttgaacgagcacctttcactgaaagtcacattgycagttttcacaggctggtg
aaggagagacaggacagagatacagaagctgcaagtcgtatgatgagagagtttgcacag
aaagaagcaatgaaacaaaaacagatagatgaaataagagaccagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagcagarctgaagaatgta
aaaagtgaattgcagcagctggaggggttttcagacagagttagtgagttggatgaggag
attggcaaaacggaacatgagctgcagaaggctgagaggaacagcaatgtagaaacactc
gaacgggaagtacagactctgcaaaatgagaaaataaacctggacaaagctcttaggagg
ttggatcaagagatggagcagttgaatctgcacaccacaacaattacccaaatggaaatg
ctgaagaaagacaaggcagagaaagaagaccagataagaaaagtaaaatcaagacattct
gaggaactaacatcactgttgggatacttccccaataaaaaacagcttgaagactggctt
catggtaaaaataaaaagatcaatcagacaagggatactcttgctaatcttaacaaacga
ctggcatcagtagagtatgataaaacttatgccagtaatgagctaagaaaaaaagaagac
cagttgtccaatcatgaagcaaaactttttgatgtttgtggaagtcaagattttgacagt
gacctgaacaaacttcaagatgaaattgagaaaagttccaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacagctgacagaggagaagcagtcttgt
tgtccagtttgccaaagggtttttcagacagaggctgaactgcaagatgtcattagtgat
ctgcagtccaagctgcgccttgccccagacaaactgaagtcaacggagtctgagcttaaa
agaaaggagaaaaaacgtgatgaaatgatgagtcttaaacctctgcggcgaactgtactt
gaactccaagataaggaaattccagacctgaggaaccagatccagaatgcaaacagagat
ttaacaagcctgaagggcgagatagaagaatatgaatcactcctgcagatagctttgtct
gaggaagaaggtgccaaagcatgcttacaggatataacactgatggaaaggtaccagact
gatattagagatcttgaacgaaaaattgctcagcaggaggctaagttgctrggagttgat
ttaagtagaaccgttcttcaagtaagccaagaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaagcaaaaactgaagcaggaccagcaaagccagatt
cagcagctgaagagtgcagttaatgagctcaaagcagagaagctgcagattgtcagcagc
atgcagcggcggcggcagctggaggagcagaccgtggagttaaccactgaggttcgctcc
ttatgcagagagatcaaggaagcaaaagaacaggtacttcctttggatgcaatgttagac
aaactgcagcaggagaaggaggatctagtgaataagaggactgcaagtaataaagaaaca
caagagaagatgaatgccatgaatgagaaagttaaagatataaacaagtacgtgaaagaa
attgaaaactatattcaacaaggaaaagaagactataaaaagcaaaaggagtccgaactt
ggtgaagtaagttcgcagttggctgcctgtgagaagcagaaggaaaagataagtaaagag
atggagatgattcggcaagatattgacactcaaaagatacaagaaaggtggctggaggat
aatctcactttgaggaagcggaatgaagagctcaaagaagttgaagacaatattaaacaa
cttatgaaggagatgggagaaatgaaagtcccccagatgaaaaatgaacaaaaacgtttg
gaggagaaaatagaatccctgaaaaggaaccatcacgtkgcacttggccgccagcgtggc
ttcgaggaggagattgttcgctwtagaaaggagctcagagagccacagttcaaagatgca
gaggaaaaatacagggacatgatgattgtcatgagaacaacagagctggtgaacaaagat
ctggacctttactacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgagatctgtggcgaagcatttacagaggacaagatatt
gaatatatagaaatccgctctgatgcagatgagaatgtctcagccactgacaaaagaaga
aattacaattacagggtagtaatggtgaagggagatacagccctggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctctcatcattcggcttgccctagcggaaaca
ttctgtcttaattgtggcattctggccctggatgagcccacgaccaacctcgaccgagaa
aacatygagtccctggcacatgccctgatggagataataaagagccgctcacaccaacgc
aactttcagcttctggtgattactcacgatgaagattttgttgaacttctgggccgttct
gagtacgtggaatcrttctacaggataaacaaaaacattgaccagtgctctgagatcgtg
aaatgcagtgtcagctccctaggctcctatgttcattag
DBGET
integrated database retrieval system
