Malurus melanocephalus (red-backed fairy wren): 130584166
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Entry
130584166 CDS
T09178
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130584166 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130584166 (MSH6)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
130584166 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
ATPase_2
MUM1-like_PWWP
AAA_22
Gta3
Motif
Other DBs
NCBI-GeneID:
130584166
NCBI-ProteinID:
XP_057239968
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MSRQSTLLSFFSKAPAPAAGPEPQRRRGPGERNGLQAAGSPPGGTGRAAAPRRENGENGD
KGEKSNKGENGEKSDKGEKGDKGEKSAGGGAAAKAPSVSCEYSPGDLVWAKMEGYPWWPC
LIYNHPTEKTIVRGKGKSTRVHVQFFDDSPTRGWISIKYLRPYKGSSDGETMKGGVFYST
KPEIKRAMVLADDAMSKDKTKRLKLAVCNEPSDTEEEEEEIEEMNEDASANSEDSNSEED
VKSHKRVVSRERAVKAKRRRVLDSDSDHDGSDVEFQPDGKEAASSEEASSGVDENESSDT
EAESIAESPVKVPSKRKRTEVKKPAKRSSLGNECSETPKRAATVSSEAKSKLTSFAAPES
FESQANASSGGTGGFTVWEHEKLEWLQEGKKKDAHRRRQGDPDYDPCTLYVPEDYLNKCT
PGVRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHSGFPETAFG
RFSDVLVQKGYKVARVEQTETPEMMEARCKSXGHSSRFDKVVRREICRIJTKGTQTYSVM
DCDPSENHSKFLLCLKEKEDSAGGRLYGVCFVDTSVGKFHVGQFSDDRHCSRFRTLVAHY
TPVQVLFEKGNLSVDTQKILKGSLVSCIQEGLTSGSQFWNASKTLKVLLEEGYFKEKQNS
ENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQELLSQANFEEY
VPVDIAAKXVSSGSLFARTGQRMVLDGVTLMNLEVLQNGTNGXTEGTLLERIDSCCTPFG
KRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVTEHLKKLPDLERLLSKIHSIGS
PLKSQNHPDSRAIFYEELKYSKKKIADFLSALEGFKVMNEIVDIMEEVASDFKSKVLRQL
VTRKAKNPEGRFPELSAELTRWDTAFDHNQARKTGVITPKAGFDPDYDEALRDIKAVEED
LQKYLEKQRKLLGFKSVHYWGTGKNRYQXEIPESAISRKLPEEYELKSSRKGYKRYWSKE
IEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNGKDWHTAVECMAVLDVLMSLAHYSQDG
DGPLCRPVILLPVDNAPPFLELRNSRHPCITKTFFGDDFIPNDIVIGSKDEGSSGEASCV
LVTGPNMGGKSTLMRQVIMLVQVAQXXCYVPAERCRLTPIDRVFTRLGASDRIMAGESTF
FVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVLEELAQRIRCRTLFSTHYH
WLLEECSQSGAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFNAARLADIPE
EVIQKGHRKAKEFEKTTIXLRIFRYLCRVLDGTTGDANAVXKLTAMIDRL
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcagagcaccctgttgagcttcttctccaaggcccccgctccggcagccggc
cccgagccccagcggcgccgcggcccgggggagcggaacggcctccaggccgcgggcagc
cccccgggcgggacgggccgagcggcggcgccgcgccgggagaacggcgagaatggcgac
aagggcgagaagagcaacaagggcgagaatggcgagaagagcgacaagggggagaagggc
gacaagggcgagaagagcgcggggggcggcgcggccgccaaggcccccagtgtctcctgt
gagtattctcctggggacttggtgtgggccaagatggaaggttatccctggtggccgtgt
ctcatatacaaccacccaactgaaaagacaatagtcagaggaaaaggaaaatccactcgt
gtccatgtacagttctttgatgacagccctacgaggggttggatcagcattaaatacctg
aggccatataaaggttcatcagatggggagacgatgaagggaggtgtrttttacagcaca
aagcctgaaattaaaagagctatggtgctggcagacgatgccatgagcaaagataaaact
aagaggcttaaactggcagtatgcaatgagccttcagatacagaggaggaagaggaagaa
atagaggagatgaatgaagatgcatcagccaacagtgaagatagcaatagtgaggaggat
gtgaaaagccataagcgagtggtgagcagggaaagagcygtaaaagccaagagaaggaga
gtgttggattctgacagtgatcacgacggctccgatgtggagttccagcctgacgggaaa
gaagcagcaagcagtgaggaagccagcagtggggtggatgaaaatgagtcttctgacaca
gaggcagagagtattgcagaaagccccgtaaaagtcccttctaaacgtaagagaacagag
gtgaaaaagcctgctaaaaggagtagcttgggaaatgaatgttctgaaacacccaaaaga
gcagcaacagtctcttcagaagccaagtctaaactgacatcatttgcagcacctgaaagt
tttgaatctcaagcaaatgctagcagtggaggcactggcggcttcacggtgtgggarcac
gagaagctggagtggctgcaggaagggaagaagaaggatgcgcacaggaggcgtcagggt
gaccctgactacgacccctgcactctgtacgtgcctgaggattatctcaacaagtgcacg
ccrggcgtgcgccggtggtggcagctcaagagccagaacttcgatgctgtgatytgctac
aaggttggaaagttctatgagttgtaccacatggatgcggtcacgggcgtcaacgagctg
ggcctgatctttatgaaaggcacgtgggcccactcgggrtttccagaaaccgccttcggc
cgcttctccgacgtgctggtgcagaagggctacaaggtggcgcgygtggagcagacggaa
acgcccgagatgatggaagcgcgctgcaagtccrygggccactcgagcaggtttgacaag
gtggtgcgccgggaaatctgcaggatcmtcaccaagggaacgcagacctacagcgtcatg
gactgcgacccctccgagaaccacagcaagttcctgctgtgcctcaaggagaaggaggac
tcggccgggggrcgcctctacggggtctgcttcgtcgacacctccgtgggcaagttccac
gtgggccagttctcagacgaccgccactgctccaggttcaggacgctggtagctcattac
acccctgtacaggtgctgtttgagaaggggaacctgtctgtggacacacagaagatcctg
aagggctcgcttgtttcttgcattcaggaagggctgacctcgggttcccagttctggaat
gcgtctaaaacactaaaagtccttcttgaggaaggatatttcaaggagaagcagaactct
gaaaatggmtgttctctgccctctgtaatcaaatctctgacttcagagagtgactccctg
ggattaactcctggtgaaaacagtgaattagctttgtcagctctcgggggatgtgtcttc
tatctcaaaaaatgtctgatcgatcaggagctgttatcacaggcaaacttcgaggagtat
gtccctgtggatattgctgcaaaaamcgtgagttcgggtagtttgtttgccagaactggc
cagaggatggtgctggayggagtcaccctgatgaacttggaagtgctgcagaacggaacc
aatggargcacagaaggtactttgttggaaaggattgactcttgttgtacaccatttggg
aagcgactcctgaagcagtggctctgtgctccrctttgcaatcctaaatccatcaacgat
cgcttggatgctgttgaggacctcctggcagtgccagataaaatgtctgaagtcactgag
cacctcaagaaactrcctgaccttgaaaggctgctcagcaaaattcacagcatcgggtca
ccactcaaaagtcagaaccatcctgacagcagggccatcttctacgaagaactcaaatac
agcaaaaaaaaaatcgctgactttctgtctgcactggagggatttaaagtaatgaatgaa
attgtggatatcatggaagaggttgccagtgacttcaaatccaaagtcttgaggcagctg
gtsacccgtaaagccaagaatcctgagggccgcttcccagagctgagtgcagagctcacg
aggtgggacactgcctttgatcacaaccaggctcggaagacaggagtgattaccccaaag
gcaggttttgaccccgattacgatgaagcgctacgggatatcaaagctgtkgaggaagat
cttcaaaagtacctggaaaagcaacgcaagctgctgggattcaaatccgtgcactactgg
gggacgggcaagaatcggtaccagmtggaaatcccagaaagtgccatatctcgcaagctg
cctgaggagtacgagctgaagtcgagcaggaagggctacaagcgctactggagcaaggag
atcgagaagatgctggctgccatggtgaacgccgaggagcggcgcgacgccgccctcaag
gactgcatgaggcgcctcttctacaacttcgacaagaacggcaaggactggcacacggct
gtggagtgcatggctgtgctggatgtcttgatgtcccttgctcactacagtcaagatggt
gatggacccctgtgccgacctgtaattctgctgcctgtggataatgctcctcccttcctg
gaacttcgaaattcccgccatccttgcatcacaaaaactttctttggggatgattttatt
cccaacgacatcgtgataggcagcaaggatgaaggcagcagcggtgaggcctcctgcgtg
ttggtgaccggcccgaatatgggtggcaaatccacactcatgagacaggtgattatgctt
gtgcaggttgcacaannnnnctgctacgtgcccgcggaacgctgcagactgacacccatc
gaccgcgtgttcacacggctgggagcctccgacaggatcatggctggtgaaagtaccttc
tttgttgaattgagtgagacttccagcattctccagcatgcaacagagcattcccttgtt
cttgtggatgaactgggcagaggcacggccacgttcgacgggacggccatagcgagcgcg
gtgctggaggagctggcgcagaggatccgctgccggacgctgttctccacgcactaccac
tggctgctggaggagtgttcccagagcggggccgtgcgcctgggccacatggcgtgcatg
gttgaaaacgagagtgaagacccaagccaggaaacaattacgttcctgtacaagttcatt
gaaggagcctgcccaaagagctatggcttcaatgcagcgagacttgcggatattccagag
gaagttattcagaaggggcacagaaaagccaaggagtttgagaaaaccaccattkcactg
agaatatttaggtacctgtgccgggtgctggatggaacgaccggcgacgcaaacgcggtt
casaaactcacggccatgatcgaccgcctttag
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