Malurus melanocephalus (red-backed fairy wren): 130584167
Help
Entry
130584167 CDS
T09178
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130584167 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130584167 (MSH2)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
130584167 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
DUF6437
Motif
Other DBs
NCBI-GeneID:
130584167
NCBI-ProteinID:
XP_057239969
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVEPPREALWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTAHGADARLAARELF
RTRAVIRQLAGAPGTQKLESVVLSKMNFECFVRDLLLVRHYRVEVYKNRAGSKSVKENDW
YLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSATDGQRVVGVGYVDTTLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVVQRGGILITDRKKVDFTTKDI
VQDLNRLLKSKKQEQMNSAALPEMEKQVAVSSLSAVIKFLELLSDESNFGQYELTTFDLS
QYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKSRIE
ERLNLVEAFVVDTELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMXQAINQLPNV
VQALEKHEGPHQMLLLAVFITPLTDICSDFSKFLEMIETTLDMDKVENHEFLVKASFDPN
LTELREKMNELEEKMQTLLKTAAKELGLEAGKSIKLETNSQFGYHFRVTCKEEKALRNNS
KYGIIDTQKNGVKFTNSKLSTINDEYLRNREEYEEAQDAIVKEIINIASGYAEPMQTMND
VIAQLDAFVSFAHVSNGAPVPFVRPLVLEKGQGRIVLRGARHPCIEVQDEVAFIPNDITF
EKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIASKIRGF
AMFATHFHELTALAEQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFP
KHVIQSAREKALELEEFQNIGKPEESEGEPPAKKIYREREEGEKIIQNFLCQVKALPLTD
MSEEDIKMKLKQLRNDVLAKNNSFVNEIISRTKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagccgccgcgggaggccctgtggcccgagggcgcgggggccgaggcgggc
ttcgtgcgcgccgtgctctcgctgcccgagaagcccgacaccaccgtgcgcttcttcgag
cgcggcgactactacacggcgcacggcgcggacgcgaggctggctgcccgcgagctcttc
cgcacccgcgccgtcatccgccagctggcgggggcaccgggaactcagaagcttgagagt
gttgtgcttagtaaaatgaacttcgaatgttttgtgagagatctgcttctggttcgtcat
tacagagtggaagtttacaagaacagagcagggagcaaatctgtcaaagaaaatgactgg
tatttagcttacaagggttctccaggaaatcttgcccagtttgaggaagttctctttgcc
aacaatgatatgtccacagccattggggttgtgggggttaagctgtctgccactgatgga
cagagagtagtaggagtgggctatgtcgacactacactgagaaaattgagtgtttgtgag
tttccagataatgatcagttctcaaaccttgaagctctgctggttcaactgggcccgaag
gagtgtgtgctgccaggaggagagackgcaggagagatgggaaaactgcgacaggtcgtt
cagaggggaggaatcctgattacagacaggaagaaggtggatttcacaacaaaagatatt
gttcaggatctcaatcgcttgttgaaatccaaaaaacaagagcagatgaatagtgcagca
ctgccagagatggaaaagcaggttgccgtttcatctttgtcagccgttatcaagtttttg
gagttgctgtcwgatgagtctaattttggacaatatgagctgactacttttgatcttagt
caatatatggttctagacaatgcagctgttcaagcccttaacctttttcagagttctgtg
gaaaatgcaaatactgcacagtctctagctggtttactgaataaatgcagaacccctcaa
ggacaaagactagttaatcagtggatcaaacagccacttatggacaagagcagaattgaa
gaaaggttgaatttggttgaggcttttgttgtggatacagaactacgtcagtgccttcaa
gaagatctgttacgtcgctttccagacctcaaccggctggcaaagaaattccagagacaa
gcagcaaacttacaagactgttaccgaatgtmccaggctataaatcaactgcctaatgtt
gtacaagcactagaaaaacacgaaggacctcaccagatgttgttgttggctgtatttata
acacctcttactgatatctgctctgacttctcaaagtttttggagatgatagaaacaaca
ttggacatggataaggtggagaatcatgaatttcttgtcaaggcttcttttgatcctaat
ttaacggaattaagagagaagatgaatgaactggaagaaaaaatgcagaccttactaaag
actgcagccaaagaactaggtttggaagctggcaaaagtatcaaactggagacaaattca
cagtttggatatcactttcgagtaacttgtaaggaggaaaaagctctccggaataattcc
aaatatggaatcattgatacgcagaagaatggcgtgaagttcactaacagcaagctgagc
accatcaatgatgaatatctgaggaacagggaagagtatgaagaggctcaggatgcaatt
gttaaggaaatcattaacattgcttcaggttatgcagagcccatgcagaccatgaacgat
gtgatcgctcagctggacgcctttgtcagctttgcccacgtgtccaacggagccccggtg
ccctttgtccgcccgctcgtcctggagaagggccagggcaggatcgtgctcaggggcgcc
aggcatccctgcatcgaggtgcaggatgaggtggccttcatccccaatgacatcacattt
gagaagggcaagcagatgttccacattattactggccctaacatggggggaaagtccaca
tacatccgacagacaggggtgatagttcttatggcccagatcgggtgttttgtgccgtgt
gactccgcagaaataaccattgtggattgtatcctggctcgggtgggagcaggagacagc
cagctcaaaggagtgtctactttcatggctgaaatgctggaaactgcttcaatcctcagg
acagccactgagaactcgctgataatcatcgacgagctgggaaggggaacttccacctac
gacggctttggcttagcctgggctatctcagagtacatcgccagcaaaatccgtggcttt
gccatgtttgccacgcacttccacgagctgacagctctggctgagcaagtgcccacagtg
aacaacctccatgtcactgctctgaccagtgatgacacgctcaccatgctttatcgtgtc
aaggaaggtgtttgtgaccagagttttggaatacatgtggcagagctggcagctttccca
aaacatgtgatacaaagtgcaagagagaaagccttggagctggaggagtttcaaaacatt
ggcaagcccgaggaatctgaaggagaaccaccagccaaaaaaatatacagagaaagagag
gaaggtgaaaagataattcagaattttctttgtcaagtgaaagcattgcccctgacagat
atgtcagaagaagacatcaaaatgaagctgaaacagctgagaaatgatgtgctggcaaag
aacaacagttttgtgaatgaaatcatttctcgaacgaaagttacatcatga
DBGET
integrated database retrieval system
