Malurus melanocephalus (red-backed fairy wren): 130584183
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Entry
130584183 CDS
T09178
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmea03041
]
130584183 (DDX1)
03016 Transfer RNA biogenesis [BR:
mmea03016
]
130584183 (DDX1)
Enzymes [BR:
mmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130584183 (DDX1)
Spliceosome [BR:
mmea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130584183 (DDX1)
Transfer RNA biogenesis [BR:
mmea03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
130584183 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
130584183
NCBI-ProteinID:
XP_057239987
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGGVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDTEKGQIKFSKNGKDLGLAFEIPSHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYVGLCKAPESSVVKSQHAGSAQVVQAQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKIN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcggaaatgggtgttatgcctgagattgctcaagcagtggaggagatg
gactggcttcttcctacagatatccaagcagaatccatcccattgatcttgggaggtggt
gatgtacttatggctgctgaaacygggagtggaaaaactggtgcattcagcattccagtt
atccagattgtttatgaaacactgaaagaccagatggaaggcaagaaaggaaaagccact
attaaaacyggagggggagtgctcaataaatggcaaatgaacccctatgacagaggatca
gctttcgcaattggatcggatggtttgtgttgtcaaagcagagagataaaagaatggcat
ggatgcagagcaactagaggcgtgactaaagggaaatactactatgaagtttcctgtcat
gaccaaggcttrtgcagagttggttggtcaactatgcaggcttccctagatctgggcact
gataaatttggctttggctttggtggcactggtaagaaatctaacaacaagcagtttgac
agctatggtgaggaattcactatgcatgatacaattggatgttatctagacacagaaaag
ggacaaataaagttttcaaaaaatgggaaggaccttggccttgcgtttgaaatcccatcg
catataaggaatcaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaggaggatttcaagtttccaccaaaagatggctacgttggtctttgcaag
gctcccgagagtagtgtagtgaaatcacaacatgcaggaagtgcacaagtcgttcaagca
cagaaccttccaaatgctccaaaagcattgattgtagaaccatcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaagaaatatgttgataatcccaaattaagggaa
ctgctaattattggtggagttgctgccagagatcaactttctgtactggaacaaggcgtg
gatattgtggtcggaactcctggccggctggatgacctggtctcaacagggaagattaat
ttatctcaagttagattcctggttctggatgaagctgatggacttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacctcagatggaaagaga
cttcaggtgattgtgtgctctgcaacactgcattcttttgatgtgaaaaaactgtctgaa
aagataatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtgcatcatgtggttgtgcctgtaaatccaaaaactgataaactctgggaaaggcttggc
aagaatcatatcagaactgacgaagtacatgcaaaagacaatacacgacctggcgctaac
actccagaaatgtggtctgaagctattaaaattctaaaaggagaatacactgttcgggca
atcaaagagcacaagatggaccaagccattattttctgcaggactaaaatagactgtgat
aatatggagcagtacttcatccaacagggcggaggccctgataggaagggacatcaattc
tcatgtgtctgtctgcatggtgatagaaaacctcaagaaagaaagcaaaayctggaaaga
tttaagagaggagatgtccgttttttgatctgcacagatgttgctgctagaggaattgat
attcacggtgttccatatgttatcaacgtgacactccctgatgaaaaacagaactatgtt
catcgaattgggagagtaggcagagctgagaggatgggtttggcaatctcccttgtggca
aaagagaaagaaaaggtttggtatcacgtatgcagtagtcgtggaaaaggatgttacaac
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctggga
gagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagtmccg
gtggatgattttgatgggaaagttacatatgggcagaaaagagctctgggtggtggactg
tacaaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttrcatcttggctatcttcctaaccagctgttcagaacattc
tga
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