Malurus melanocephalus (red-backed fairy wren): 130584820
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Entry
130584820 CDS
T09178
Symbol
USHBP1
Name
(RefSeq) harmonin-binding protein USHBP1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmea03037
]
130584820 (USHBP1)
Cilium and associated proteins [BR:
mmea03037
]
Primary cilia and associated proteins
USH complex and associated proteins
130584820 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
130584820
NCBI-ProteinID:
XP_057241020
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MSQSSIGEAGHSGTSIVELGQTGTPSVGLXHAGSPGSPRQEDPSMQKETPMSATHSDPVG
QGPDILPWPLQLPCEEEEEEDGERDDDDVDDEDEDEDEEDMAGDTEDILHYEQRTAGLLA
RVAQRQQRHHPARKEEDGWEATVSVPTASPAPRHXDGTRLDASSPDLFEDLQHXVSSLER
VVFSRHRQLPAQPLPGKAWHRVVKSLEELNRTPGWACRLWPEVAVGPELPSEVAVEAARN
ATLRAALGHRDEELGQATTALQALRGDRDRLQGKVQELREALSRLEEPGGFGSASPRLSD
SPGLSSPPGRLDVTQGGDDAQPXGIKSHGMQPHTPLSPQPLTGAGRDQEERLQQLQGCLG
RLQEVNRELAAALHECKGEAERLSMELGQHESRSTALRLALRCSEHCGGAYATLLDLVRA
KVASEDVAHGAPVGTPRAGTPARTSPAPCPGAAAKPSPGHGSGSNPTPTEAPRLPGPAKP
DSREDTSDSGSPGVQSPQGMEEGALREHIQRLRAEQAAVEGSLLDAPEPSGPPCGRDPRA
RAERALRDARALLSGWRRPEKAELLPELAMLKEAMAELRTRLQLAEREKRALEVLVAGQG
PREATLRLVLQHLEWERDGRDGPSSSSGSSEDAQIGRGTAMAPQNPXDPERMREELFRIR
ARTEELHHRAQELVLSLEHGSAASRAQQAQSITVTMDLFQAHRALALAYRGARRKQAEQL
RRLEAQAGALRRQHGRREQALARKLRSLEQGTAGSETCI
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagagctccattggggaagcaggacattctgggacctccatcgttgaactggga
cagactgggactcccagtgtgggactggracatgccgggagcccagggagccccaggcaa
gaggatcccagcatgcagaaggaaaccccgatgagtgccacgcactctgaccccgttggc
cagggccctgacatcctgccctggcccctgcaactcccatgtgaggaggaggaggaggag
gatggagaaagggatgatgatgatgttgatgatgaggatgaggatgaggatgaagaggac
atggcaggtgataccgaggacatcctgcactacgagcagcgcactgcagggctgctggcc
agggtggcccagcgacagcagcggcaccaccctgccaggaaggaagaggatggctgggag
gccactgtcagtgtccccactgctagcccagcaccacgacaccrcgatggcaccaggctg
gatgcgagcagcccagatctcttcgaggacctccagcatgycgtgagctccctggaacgc
gtcgtcttctcccgacaccggcagctgccggcgcagccgctgcctggcaaggcctggcac
agggtggtcaagagcctggaagagctgaaccggacccctggctgggcctgccggctgtgg
ccagaggtggcagtgggcccagaactgccgtcagaggtggcggtggaggcagcgaggaac
gcgaccctgcgggcggccctggggcaccgggacgaggagctgggccaggccacgactgcg
ctgcaggcgctgcggggtgaccgggaccgcctgcagggcaaggtgcaggagctgcgggag
gctctgtccaggttggaagagccaggaggatttggcagcgccagccccaggctcagcgac
agccccgggctcagcagccccccgggacgtttggacgtgactcagggtggcgacgatgct
cagccccamgggataaaatcccatgggatgcagccccacacccctctctcgccccaaccc
ttgacgggagcgggtcgagaccaggaggagcggctgcagcagctgcaggggtgcctgggg
agactgcaggaggtgaaccgggagctagcggccgcgctccacgagtgcaagggcgaagcg
gagcggctgagcatggagctggggcagcacgagtcccgcagcaccgccctgcgcctggcg
ctgcgctgcagcgagcattgtgggggggcctatgccactctcctggacctggtgcgggca
aaggtggcatcggaggatgtcgcccatggggcccctgtgggcaccccccgggcagggaca
cctgcccgcacctcgcccgccccgtgcccaggagccgcggcgaagccgagcccgggacac
ggatctgggtccaaccccaccccgactgaggcaccgcggctaccgggaccagcaaagccg
gacagccgcgaggacaccagcgacagcggctccccgggggtgcagagcccccaagggatg
gaggagggagccctgagggaacatatccagcggctccgcgccgagcaggcggcagtggag
gggtccctgctggacgcccccgaaccctccggccccccctgcgggcgggacccccgagct
cgggccgagcgggcactgcgggacgcgcgggcactgctgtccggctggaggcggccggag
aaggcggagctgctgccggagctggcgatgctcaaggaggccatggccgagctgaggacg
cggctgcagctggcggagagggaaaagcgtgctctggaagtgctggtggccgggcaggga
ccgagggaagccaccctgcgcctggtgctccagcacctggagtgggagcgggatgggcgg
gatgggccctccagcagctccggcagcagcgaggacgctcagattggccggggcacagcg
atggctccacagaatcctcsggatccggagagaatgagggaggagctgtttcgcatccga
gccaggacagaggagctgcatcaccgggctcaggagctggtgctgtccctggagcatggc
agcgctgccagccgtgcccagcaggcacagagcatcacggtcaccatggatctcttccaa
gcacacagagccctggccctggcataccgcggggcccggcgcaagcaggcggagcagctg
cggcgcctggaggcgcaggcgggagccctgcgcaggcagcacggccggagggagcaggcg
ctggcccgaaagctccgcagcctcgagcagggcacggccggcagcgagacctgcatctag
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