Malurus melanocephalus (red-backed fairy wren): 130584925
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Entry
130584925 CDS
T09178
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea02010
ABC transporters
mmea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130584925 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130584925 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmea02000
]
130584925 (ABCA1)
Transporters [BR:
mmea02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130584925 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
130584925
NCBI-ProteinID:
XP_057241179
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLIDNETFSDFLHHNVSMPSSAVEELLDAEVNL
QQIIVSGYRMRLRDVCNSSATSEFLTIQNQTAAMDPEAFICTLSKEKLRAAEQVFRANLN
PFKPLQRRLSFNSSLWDLSETVETLRESTGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNNPEDFETENG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFAVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEESQDRQHPHPDQKGPSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLSEKKVKAEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVSEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMEGHSIPDTPCTVGQKEWTTA
SVPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKXQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctggggttgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccatggatacaggggatcatctgcaatgccaacaatcct
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcagatgccaagaggttactgctgtacagccaacaggacaca
agtataaaggatgtccagaaggtcctgggaaaactacgcaagttgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgcagtagaggagctactggatgcagaggtcaacctc
cagcagatcattgtgtctggttatcgaatgcgactgcgagatgtctgcaatagctcagca
acatctgaatttcttacaatccaaaatcagacggcagccatggaccctgaagccttcatt
tgcaccttgtcaaaggaaaaactccgtgcagccgagcaagtcttccgtgctaatttgaat
cctttcaagcctcttcagagacgactttctttcaattcctccttgtgggatctatcagaa
actgtggaaactttgagagagagcactgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcattgtgtgtggccatcctgaaggtggagga
ctcaaaattaaatccctcaactggtacgaggataacaattacaaggcattgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaay
gagctaatgaagaacctggagtccagcccgctttccaggattatctggagggctttgaaa
cccttgctgattgggaagatcttgtatactccagatacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacrttactgaaaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctctcaaacaatccagaggactttgagacagaaaatggc
tctgtgtatacatgggtagatgccttcaatgagacagaccgggcgatccagaccatctca
cggttcatggagtgtgtcaacttggacaaactggagcctgtgcccacagaagtccggctt
ataaacaartctttggagcttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctgacagcacagaccttcctcaacatgtgaaatacaagatccgcatggat
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcccggtccccgt
gctgatccctttgaggatatgcgctaygtctggggaggctttgcttacctgcaggatgtg
gtggaacaggccatcatcagggttcagacgggcacagagaagaagacaggagtttatgtg
cagcagatgccatacccatgttacgtggatgacatatttcttcgtgtcatgagccgctcc
atgcctctgttcatgacactagcttggatctactcagtggctgtgataattaaaggcatt
gtgtatgagaaggaagcccggctgaaagagacaatgaggattatgggacttgacaatggc
attctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggattg
ctggtgctgatcctgaagatggggaatctgctgccttacagtgacccgagtgtggtgttc
attttcctctcgatcttcgctgttgtgaccatcctccagtgcttcctcatcagcactgtg
ttctccagggccaatctggcagctgcctgcgggggtattgtctacttcactctgtacctg
ccttatgtgctgtgtgttgcttggcaggaccacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggttttggttgtgagtactttgcactgttcgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccrttggaagaagatggcttt
agcatcaccacatctgccgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcaccaagtcctattggtttggggaggaatcacaggacaggcagcaccctcatcctgac
cagaaggggccttcagaagtctgcaaggaagaagagccggtacatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgacggcaagaaagttgctgtagatggtctc
acactgaacttctatgaaggacaaatcacctcttttctgggacataatggagcagggaaa
accactaccatgtccatcttgaccggcttgttccccccaacttcgggtacagcgttcatc
ctgggcaaagatatccgctctgagctcagcaccatcaggcagaacctgggtgtatgtcca
cagcacaatgtactgtttgacttgctgactgtggaggagcacatctggttctatgctcgg
ctcaaagggctgtcagaaaagaaggtgaaagcggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagccaggacaagccgactgtctggtgggatgcagaggaag
ctctctgttgccttagcgtttgttggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccttattctcgcagagggatatgggaactgcttctgaagtatcggcaa
ggtcgcacaatcattctctccacacaccacatggatgaggcagacattttgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggttattatttgaccctggttaaaaaggatgtggattcctctctgagc
tcctgccggaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacactctgacaatagatgtc
tctgcaatttcaaatctcattacaaaacacgtttctgaggcgagactagtggaggacata
ggccacgaattaacctacgtcttgccatacaaagctgctaaagaaggagcttttgtggaa
ctattccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctct
gaaactactctggaggagattttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatgggacattgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctatcagatg
aagggctggaagctcacccagcagcagttcatggccctgttatggaagaggatgctgatt
gccaagagaagccggaaaggtttctttgcccagattgtgytgccagctgtcttcgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagtctggaatta
caaccctggatgtatgatgagcagtacacttttattagcaacgatgctccrgaagatgca
ggcactcacaagcttttggatgcccttcttgataaacctgggtttgggacacgctgtatg
gagggacattccatcccagacactccttgcaccgtggggcagaaggaatggaccactgcy
tcagtcccagagtcagtcctggacatcttcttgaaaggcaactggagcatggagaaccct
tccccatcrtgtgagtgcagcagtgagaagatcaagaagatgctgccggtgtgcccccct
ggtgcaggcgggctgccacccccacagcgtgagcaagacacagctgacatcctccagaat
ctgacaggccgcaatatatcagactacctggtgaagacctacgcacagatcattgggaaa
agcttaaagaataaaatctgggtgaatgaattcaggtatggtggcttttccttgggagcc
agcagttccctcgtgcttcctccaagccatgaagtcactgatgccattaagcaggtgaag
aaaattttggagctggcacaggggagttctggagatcgatttctcaacagcttatcaagt
ttcatgaaaggcctggatacaaagaacaacgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctgaatgtgatcaacaatgccatccttcgagccaacctccag
cagggtgaaaaccccagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aagcagcagctctctgaagtagccctgatgaccacctctgtggatgtccttgtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtagttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggygtgaagcctgtgatctactgg
ctggccaactttgtgtgggatatgtgcaactacatwgttccagccacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtgtcctcttccaacttgcctgtactggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctccttcgtg
ttcaaaatccccagcacggcgtatgttgtgctgaccagtgtgaatctcttcattggtatc
aatgggagtgtggccacctttgtcctggagctcttcaccaacaataagctgaaggacatc
aatgacatcctgaagtctgtctttctcatcttcccccacttctgtctggggaggggactc
attgayatggtgaaaaaccaggccatggctgatgctctggagagatttggagagaatcgt
tttgtgtcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtggag
ggcgttgtgttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtttatgccaagctgcctcctgtgaatgatgaagatgaagatgtaaccagagagagg
cagaggataatcagtggaggaggacagagtgacattttggagatcaaggaactaactaag
atttacagaatgaagagaaagccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacaggaggagaagctttcctcaaaggcaacagtatcttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagtttgatgctgttaatgag
ctgctgacaggacgagagcacttggagttctttgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggcgagtgggcaattcggaaactgggccttgtgaaatacggagaa
aaatatgctggaaactacagcggagggaacagacgcaagctttccacagccattgccctt
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcgtttcttgtggaactgcgctctgagtgtaatcaaggaggggagatcagtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcgataatggtcaat
gggcgattcaggtgtctggggagtgttcagcatctgaaaaacaggtttggagatggttac
accatagtggtgagaattgcaggggcaaacccagacctgaagccwgttgaggagttcttt
gggcatgccttccctggaagtgtcctgaaggagaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctctctggccaaaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactctgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgacgacgaccatactaaggacctgtcattgcacaaamaccag
actgtggtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
DBGET
integrated database retrieval system
