Malurus melanocephalus (red-backed fairy wren): 130584987
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Entry
130584987 CDS
T09178
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03013
Nucleocytoplasmic transport
mmea03015
mRNA surveillance pathway
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130584987 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
130584987 (CASC3)
03015 mRNA surveillance pathway
130584987 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130584987 (CASC3)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130584987 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
130584987
NCBI-ProteinID:
XP_057241271
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
GGAGGKSAAESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESSKVELKQDSNDSCE
SAARGEKGNEKADPKGAVTGERQSGDGQESTEPVEKKVGKKVPKHLDDDEDRKNPAYIPR
KGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDI
RSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAKSPSAPPRSFNNRSSAG
TGRMPPARNYPRMGGYKETRPGYRASESTVPHRNGEQAKQESSYRGKRAEQSPSRDTSPE
LEVTHIHGSPGKEEGALENQATAADSAQPPPDRPVEKKSYSRARRTRVKAGEAGKLAEDV
PASEGLAPVIPKPTPAETSPPPTKSSWESQVESSVDGVEQEMTQMNLTEQNWSPGQSQFI
PPRELRGIPNHMHVGTGPPPQFNRMEEMAVPGGRVKRYSSQRQRPPVPEPAPPMHISIME
GHYYDPLQFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHPHQTPPAMANPGLYPPPV
SMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGV
TYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ggtggggcgggggggaagagcgcggccgagtcggagtgtgaaagtgaggatggcatcgaa
ggagatgccgtgctctctgactatgaaagcgccgaagactcggaggcagaagaagaggat
tacagcgaggaagaaagctccaaggtggagctgaagcaggacagcaacgattcctgcgag
tcagcggccagaggggagaaggggaatgagaaggcggatcccaaaggagccgtgacgggc
gagcggcagagcggggacgggcaggagagcacggagcctgtggagaagaaagtcgggaag
aaggttcccaagcacctggacgacgatgaggatcggaagaaccccgcgtacatcccgcgc
aaggggctcttcttcgagcacgacctccgagggcagacgcaggaggaggaggtcaggcca
aagggtcgtcagcggaagctgtggaaggacgaggggcgctgggaacacgacaaattccgg
gaggacgagcaggcccccaaraccaggcaggagctgatcgcgctgtacgggtacgacatc
cgctcagcccacaaccccgaygacatcaaaccccgcaggatgcgcaagccacggtttggc
agtccccctcagcgagaccccaactggtccaatgagagaccccccaagcccccgaggcac
cagggtgccaagagcccctcagccccaccacgctccttcaacaaccgcagctctgccggc
accggcaggatgcccccggccaggaactaccccaggatggggggctacaaggagacccgt
cctggctaccgagcttcagaatcaactgtccctcaccggaatggggaacaagccaaacag
gaaagcagctaccgtgggaagcgtgcagaacagagcccrtcgagggacacgtcccccgag
ctggaggtgacacacatccacggcagccctgggaaggaggagggggctctggaaaaccaa
gccacagctgctgactcagcacagccaccaccagacagaccagtggagaagaaatcttat
tcccgggcaagaaggaccagagtcaaggctggggaggcggggaagctggcagaggatgtg
cccgcttcygaggggctggctcccgtgattccaaaacccacaccagccgagacctcccca
cctccaaccaagagcagctgggagtcacaagtggaatccagcgtagatggagttgagcag
gagatgacccagatgaacctgacggagcaaaactggagcccggggcagtcccagttcatc
ccgccccgggagctgaggggtattcccaaccatatgcacgtgggaaccgggccgccaccg
cagtttaaccggatggaggagatggcggtgccggggggccgcgtgaagcgctactcatcg
cagcggcagagaccccccgtgccagagcccgcgccccccatgcacatcagcatcatggaa
gggcactactacgacccactacaattccagggaccaatctacacccacggtgagaaccca
gccccgctgccgccccaagggatgattgtgcagccagagatgcacctccctcatccaggt
ttacacccccaccagacgccccctgccatggcaaaccccggcctctaccccccaccagtg
tccatgcccccaggccagcccccgccrcagcagctgctcactccgacttacttctccgct
cctggagtgatgaatttcgggaatcctggctacccctacccccctggagctctgccccct
ccgccccctcctcatctctattccaacacgcaggcgcagtcccaggtgtatgggggggtc
acctactacaacactgtccagcagcaggtgcagcccaagccctccccgccccgccggacg
tcccagccagtgaccatcaagccgcctcctccagaggacagcaaaggtgaaaaatcaaag
gagaggagcaacacgtag
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