Malurus melanocephalus (red-backed fairy wren): 130585396
Help
Entry
130585396 CDS
T09178
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03013
Nucleocytoplasmic transport
mmea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130585396 (UPF2)
03015 mRNA surveillance pathway
130585396 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130585396 (UPF2)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130585396 (UPF2)
mRNA cycle factors
P-body specific factors
130585396 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
130585396
NCBI-ProteinID:
XP_057241854
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MPAERKKPTNMEEKESQLNNKEKEFSERRPVSTREKPKEDVKVGMKREPLKVPEDKKKKM
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEEEAAQ
LKEKEEAHQLHQEAWERHQARKELRSKNQNAPESRPEENFFSRLDSSLKKNTAFVKKLKT
ITEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
LQAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
SHTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
TSLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
DENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
ILFKDNEKYSQNKDSSKDESRDSKDTKDNKEAAGNEDLELELENLDINDDALELDCGDEA
EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
RRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINI
ETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLY
KDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
VNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLD
VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAVRQVQDLEREFLIKLGIVNDKDSK
DSITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLT
DSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
AIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
ADLIFKTGGRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccaactaatatggaagaaaaagaatctcagttaaataac
aaagaaaaagaatttagtgaaaggcgacctgtgagcaccagggagaaaccaaaagaagat
gtcaaggttggcatgaagagagagcctttaaaagttcctgaagataaaaagaaaaaaatg
gaagaggataaaagaaagaaggaagacaaggagcggaagaaaaaagaagaggacaaagta
aaggcagaagaagagcagaagaagaaagaagaggaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagaagaagctgctcaa
ctgaaggaaaaggaggaagcgcatcagctgcatcaggaggcttgggagcgccatcaggca
agaaaagagctacgcagcaaaaaccagaatgcaccggagagtcgtcctgaggaaaacttc
ttcagtagactggactccagtctgaagaagaacacagcttttgttaagaagctaaaaacc
attacagagcaacaaagggactccttgtcccatgactttaatagcctgaatctaagcaaa
tacattgcagaagcagtagcttctatcgtggaggccaaactgaaaatatcagatgtgaac
tgcgctgtgcacttgtgttccctctttcaccagcgatatgctgattttgctccttcgtta
cttcaggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattact
aagttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgac
aaggaaggtttgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaa
tcccacactcacgtttctgtggttatcagcttttgtcggcactgtggagatgacattgct
ggtttggtaccaaggaaagtaaaaactgttgcagagaagtttaacttgagctttcctcct
agtgagataattagcccagagaaacagcagcccttccagaatttgctgaaggartacttt
acatctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaa
aacagacgcattctccactccaaaggagagctgagtgaggatcgacacaagcaatatgag
gaatttgcaatgtcgtatcagaagctgctggcaaattctcagtctctggctgatcttttg
gatgaaaacatgcctgacctcccccaggagaagccaacacctgaggaacatggacctggt
attgatattttcacaccaggaaagcctggagaatatgacctggagggaggtatctgggaa
gatgaagatgctagaaacttctatgagaatctcattgacttgaaggcttttgtgccagca
attttgtttaaagataatgaaaaatattcccagaacaaggattccagcaaagatgaatca
cgagattcaaaagataccaaagataataaggaagccgctgggaatgaagatctggaattg
gagctggagaatctggatattaatgatgatgcactggagttagactgtggagatgaggca
gaagatcttacaaagaagcttcttgatgagcaagagcaagaggatgaagaagccagtact
ggatctcatttaaaactcatagtagatgctttcctgcagcagcttccaaattgtgtcaac
agagacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaac
agaagaaaactggtacgagcacttttcatagttcctagacaaaggttggatttgctacca
ttttatgcaagactggttgccacactgcatccctgtatgtctgatgtagcagaggatctc
tgttccatgctgaaaggggatttcagattccatgtaagaaaaaaggaccagatcaacatt
gaaacaaaaaataaaactgtgagatttattggtgaacttaccaagtttaagatgttctcc
aaaaatgatactctccactgtttaaagatgcttctgtcagacttctctcatcaccatatt
gaaatggcgtgtactttgctggaaacctgtggaagattcctcttcagatcaccagaatct
cacttaagaaccagcgttcttttggaacaaatgatgaggaaaaaacaagcaatgcatctt
gatgcacgctatgttacaatggtagaaaatgcctattactactgtaatccccctccagct
gaaaaaactgtgaagaaaaaacgtcctcctttgcaggaatatatccgtaagcttctttac
aaggatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttgg
caggatgcagaagttaaggactatgttatatgctgtatgatcaacatctggaatgtgaaa
tataatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagat
gttggaattcatgttgtggatggagtgctagaggatatccgactaggaatggaggttaat
caacccaagtttaaccagcggcggatcagcagtgccaagtttttgggggagctttacaat
tatcgaatggtggagtcagctgtaatatttagaactctctattccttcacctcatttggt
gtgaaccctgatggcagtcctagtccactggaccctccagaacatcttttcagaatcaga
cttgtctgtactatccttgatacctgtgggcaatattttgacagaggatccagcaaacga
aaacttgattgcttccttgtatattttcagcggtatgtgtggtggaaaaaaagtctggat
gtttggacaaaagaccacccttttcctatagacatagactatatgatcagtgatactctg
gaactgctgagaccaaagataaaactctgcaattctctggaagaagctgtcagacaggtg
caagacttggagcgagaattcttaataaaattaggaattgtgaatgacaaagattccaaa
gattccattacggaaggagagaayctggaagaggatgaagaagaggaggaaggtggagca
gagacagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggc
tctgacaatgaggaagaagagggtgaagaagaggaggaagaaaacacagattaccttaca
gactccaataaggaaaatgaaaccgatgaggagaatacagaagtaatgattaaaggagga
ggactgaagcatgtcccttgtgcagaggatgaggacttcattcaggccttggataaaatg
atgctggaaaatcttcagcaacggagtggtgaatctgtaaaagtgcatcagctggatgtt
gctattcctctacatctcaaaagtcagctgaagaagggcccccctcttggaggtggggaa
ggagagtcagagtctggggacacgatgccatttgtcatgttaacacgaaaaggcaacaaa
cagcagtttaagatcctaaatgtaccgatgtcttcccaacttgctgcaaaccattggaac
caacagcaagcggaacaggaggagagaatgagaatgaaaaagctcactttggatatcaat
gaacggcaagaacaagaggactatcaggaaatgttgcagtctctggcacagcgtccagct
ccagcaaatactaatcgtgagaggcggcctcgttaccagcatccgaagggagcacctaat
gcagatctaatctttaaaaccggtgggaggagacgttga
DBGET
integrated database retrieval system
