Malurus melanocephalus (red-backed fairy wren): 130586206
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Entry
130586206 CDS
T09178
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130586206 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmea03041
]
130586206 (PRPF40A)
Spliceosome [BR:
mmea03041
]
Complex A
U1 snRNP components
U1 related factors
130586206 (PRPF40A)
Complex B
130586206 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
Motif
Other DBs
NCBI-GeneID:
130586206
NCBI-ProteinID:
XP_057242904
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQQSSTTTSSASEDHSKQKST
WTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTK
ESRWAKPKELEDLEAMIKAEENSTKPEDAAAATSAPAAAAAVDAPSGAVAAPTADGATAT
AAPTGATAEGESAPAAAPGDTDGAGTAPTEEQGQAGAAPGAQDGSTDTAAATVEEAAKQE
STGDAAVKKEDEEAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPR
YREFDFPTIQNSNKPVFLYFCPHHLKKQNPLDFSHQEQAKQLRKRNWEALKNILDNMANV
TYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRER
RRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTALDLFKFY
VEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSL
LEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDIT
LESERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKK
RQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKERERDSE
KERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggaatgccccactatccccccatggggatgcatcccatggggcagaga
cctcccaacatgcccccagttccccacgggatgatgcctcagatgatgccccccatggga
ggacccccgatggggcagatgcctggaatgatgcagtcagtgatgcctggaatgatgatg
tcccacatgtcccaggctgccatgcagcccacggttcctccaggtgtgaacagcatggat
gcacaagtaggtgtgacccctcctggaactcagacaacgcatcccgtggtctccacagtc
cagcaaagctccaccaccaccagctctgccagygaggatcactccaagcagaaatccacg
tggacggagcacaaatccccagatggaagaacttattactacaacactgagaccaagcag
tccacgtgggagaagccagatgacctcaaaacccctgctgagcaattgttatccaagtgt
ccctggaaagagtataaatccgattctgggaagccttattattacaattcccaaacaaag
gaatcccgctgggcaaaacccaaagagctggaggatcttgaagcaatgattaaagctgaa
gaaaacagcacgaagccggaggacgcggccgccgccacctcagcccccgccgccgccgcc
gctgtggacgctccgagcggagccgtggccgccccaaccgccgacggtgccacagccacg
gctgcacccacgggagccactgctgagggggaatctgctccggctgctgccccgggggac
acggatggtgctgggacagcacccaccgaggagcagggccaggctggagccgcccccgga
gcgcaggacggcagcaccgacacggcagcggccaccgtggaggaggcggccaagcaggag
agcacgggagatgctgctgtaaagaaggaggatgaggaggcccaaccagttaaaaaaacc
tacacctggaacacaaaggaagaggccaaacaagcatttaaagaactattaaaagaaaag
cgagttccatccaatgcttcctgggagcaagccatgaaaatgatcatcaatgaccccaga
tacagggaatttgacttcccaacaatccaaaattctaacaaacctgtttttctgtatttc
tgtccacaccacctcaaaaaacaaaaccccctggacttttcccatcaggaacaagccaag
cagctccggaagaggaaytgggaagctctgaagaacattctggacaacatggccaatgtc
acctactgcaccacatggtctgaggcacagcagtacctcatggacaaccccacctttgct
gaggatgaggagctccagaatatggataaggaggatgcactgatctgttttgaggagcac
atcagggccttggaaaaggaggaggaggaagagaagcagaaaagtttgctgagggaaagg
aggaggcagcggaaaaacagggaatctttccagctgtttttggatgagctgcacgagcac
ggccagttacattccatgtcctcctggatggaattgtatccagccatcagctccgacatc
aggttcaccagcatgctcggccagcctggatcaactgcactcgacctgttcaagttctac
gtggaggatttgaaagctcgttaccatgaygagaaaaagatcattaaagacatcttaaag
gataaagggtttgtggtggaagtgaacacttccttcgaggattttgtcactgtcatcagc
tccaccaagagagccaccactctggatgcagggaatatcaagctggctttcaacagtctc
ctggagaaggcggaggcgcgggaacgggagagggagaaggaggaagccaggaagatgaag
aggaaggaatcagccttcaagagcatgctgaaacaagccacaccccccatcgagctggat
gcagtctgggaggatatcagagacagatttgtgaaggaaccagcatttgaggatatcacc
ctggaatctgaaaggaaaaggatatttaaggatttcctacatgtacttgagcacgagtgt
caacaccaccactccaagaccaagaaacattcaaagaaatccaaaaaacatcaccggaag
cgctcccgttcccgctccggttctgagtctgaggatgatgacagccactccaagaagaag
cggcagcgctcggaatcgcggtcggtgtcggaacgttcttccagcgccgaatccgagagg
agttataagaagtccaaaaaacacaagaagaagagcaagaagaggaggcacaagtctgat
tcaccagaatctgatgtagaacgagagaaggacaagaaggagagagagagggacagtgag
aaggaaagagcccgacagagatccgagtccaagcataaatctcccactaaaaaacggcct
ggaaaagattccggaaactgggatacctctggcagcgagctgagcgagggggagctggaa
aaacagaggaggactcttttggagcagctggatgaagatcaatga
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