Malurus melanocephalus (red-backed fairy wren): 130586295
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Entry
130586295 CDS
T09178
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130586295 (MEX3D)
04121 Ubiquitin system [BR:
mmea04121
]
130586295 (MEX3D)
Enzymes [BR:
mmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130586295 (MEX3D)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130586295 (MEX3D)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130586295 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
KH_KhpA-B
zf-C3HC4_2
zf-C3HC4
KH_DEAH11_2nd
RING_XB3-XBAT31
zf-RING_UBOX
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130586295
NCBI-ProteinID:
XP_057243054
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKR
EILSAAEHFSMIRATRNKVNGLAGALQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKR
IQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHITMRTGSFIDVNADNDFHSNG
TDVCLELQGGAAAPWAKAPHGAQRPSAALRNDSLSSLGSGSTESFYSGRVAAASPTSPYS
TFSEPPAPLGSDECDFGFDFLALDLTTPTAAIWSPFERSGNPLQAFSSCSSINGSQRRNS
GPATPRHSPTLPESGAAALEHPSARRIPSDPAGALAWLPAQGSLSSFSNSTGYSSSSSLP
GSISAASGSPTDSSSSDGHRKSSRECMVCLESEVMAALVPCGHNLFCMECALRICGRAQP
QCPACHAPATQAIHIFS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtgcgtgcccgtgcccagctccgagcacgtcgccgagatcgtgggccggcaa
ggctgcaagatcaaagccctgcgygccaagaccaacacgtacatcaagacgccggtgagg
ggtgaggagcccgtgttcatcgtcaccggccgcaaggaggacgtggagatggccaagcgc
gagatcctgtcggccgccgagcacttctccatgatccgggccacrcgcaacaaggtcaac
gggctggcaggagccctgcaggggccacccaacctgccgggccagaccaccatccaggtg
cgggtgccctaccgcgtggtggggctggtggtggggcccaagggagccaccatcaagcgy
atccagcagcagacgcacacytacatcgtgacrcccagccgcgacaaggagcccgtgttc
gaggtgacgggcatgcccgagaacgtggaccgggcgcgcgaggagatcgaggcgcacatc
accatgcggacaggctccttcatcgacgtcaacgccgacaacgacttccactccaacggc
accgacgtctgtctggagctgcagggcggcgcggccgccccgtgggccaargctcctcac
ggcgcccagcgcccctcggccgcgctgcgcaacgacagcctcagctcgctgggcagcggc
tccaccgagtccttctacagcgggcgcgtggcggccgccagccccaccagcccctacagc
accttcagcgagcccccggccccgctgggctccgaygagtgcgacttcggcttcgacttc
ctggccctcgacctcaccacgcccaccgctgccatctggtcgcccttcgagcgctcgggc
aaccccctgcaggccttcagcagctgctcctccatcaacggctcgcagagacgcaacagc
ggcccggccacgccgcgccactcgcccacgctgcccgagagcggggcggcggcgctggag
cacccctcggcgcggcgcatccccagcgaccccgcgggcgccctggcctggctgcccgcc
cagggctcgctctcctccttctccaacagcaccggctactcctcctcctcctcgctgccc
ggcagcatctcggccgcctcgggctcgcccaccgactcgagcagctcggacgggcaccgc
aagagctcgcgggagtgcatggtgtgcctggagagcgaggtgatggccgcgctggtgccc
tgcggccacaacctgttctgcatggagtgcgccctgcgcatctgcggccgggcgcagccg
cagtgccccgcgtgccacgcgcccgccacccaagccatccacatcttctcctag
DBGET
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