Malurus melanocephalus (red-backed fairy wren): 130586361
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Entry
130586361 CDS
T09178
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130586361 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmea04040
]
130586361 (SCN8A)
Ion channels [BR:
mmea04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130586361 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
130586361
NCBI-ProteinID:
XP_057243131
LinkDB
All DBs
Position
Unknown
AA seq
1978 aa
AA seq
DB search
MAARLLAPPGPESFKPFTPESLANIEKHIAELKKKQRSKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPVNVNETFLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
LSSKSAKERRNRRKKRKDKELSEGDEKCDTEKVFKSESEDGMRRKAFRLPDNRLGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKSRFRDPVSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPALRRSVKRNSTVDCNGVVSLIGGPPSSMPGGRI
LPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFE
HVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYK
ECVCKINPDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAH
FKQREADEVKPLDELYDKKVNCIANHTGADINRDIDFQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDETSSSEGSTIDIKPE
VEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTDCEALMPP
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFISRRPAS
TKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDTRESKC
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccccgagagttttaagcccttcactccggag
tcgctggccaacatcgagaagcacatcgccgagctgaagaagaagcagcgctccaagcag
gacagcagccaccgcgatgacgacgaggacagcaaaccaaaaccaaacagtgaccttgag
gcgggcaagaatttgcctttcatctacggggacatccccaaagggctggttgctgtgccg
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctc
tttagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccgcccgaatggtccaagaat
gtggagtacacattcactgggatttacaccttcgaatctttggtgaaaatcatcgccagg
ggtttctgtatagatggcttcaccttcctgagggacccgtggaattggttggatttcagt
gtcatcatgatggcatatgtcacagagtttgtggaccttgggaatgtctcagcattgaga
actttcagagttctccgagctttgaaaactatctctgtgattccaggcctgaagaccatc
gtgggtgccctgatccagtcggtgaagaagctgtcggatgtgatgatcctgacagttttc
tgtctcagtgtctttgccctcatcgggctccaactcttcatgggcaacctgaggaataaa
tgtgtgatttggccagtgaatgtcaacgagaccttcttggataatggctccaggggcttc
gactgggaggagtacaccaacaatatgtcaaatttttacatcattcctggcgcccccgac
cctttgctctgcggtaacagctcggatgcaggccaatgtccagagggatacacgtgtatg
aaggcaggacgcaaccccaactacggctacacgagcttcgacaccttcagctgggctttc
ctggctctgtttcgccttatgactcaggacttttgggagaacttgtatcaattaacttta
cgagcggcaggaaaaacctacatgattttctttgtgctggtgatttttgtgggatccttc
tacctggtgaatctgattttggctgtggtggccatggcctaygaggagcagaaccaggca
actctggaggaggccgagcagaaggaggcagaattcaaagccatgttggaacaactgaaa
aagcaacaggaggaagcacaggctgctgccatggtcacctcggccgggacggtctctgag
gatgcagtggaggatgatggtggggggaggatgtcccggagctcctcagagatctccaaa
ctcagctccaagagcgccaaggagcgtcggaacaggaggaaaaagcgcaaggacaaggag
ctgtcggagggggacgagaagtgcgacactgagaaggtgttcaagtcggagtctgaggat
ggcatgaggaggaaagcgttcaggttgccggataacaggctggggaggaagttttccatc
atgaaccagtctctcctcagcatcccgggctcccctttcctgtcgcgccacaacagcaag
agcagcattttcagctacaagagccgtttccgtgacccggtgtcagagaacgagtttgct
gatgacgagcacagcacggtggaggagagcgagggcaggagggactctctgttcatcccc
atccgyggccgtgaccggcgcagcagctacagcggctacagcggctacagccagggcagc
cgctcctcgcgcatcttccccgccctgcgccgcagcgtcaagaggaacagcacggtggat
tgcaatggagtggtgtccctgatcgggggcccgccctccagcatgcccgggggccgcatc
ctgcccgagggtaccacagaaatcgaaatcaggaagaarccgggcgggtccctcttggtg
tccatggatcaggtgaacgcgtcctatgggaggaaggatcgcaccaacagcgtcatgacg
ggcttgaccaacaccctggtggaggagctggaggagtcgcagaggaaatgccccccttgc
tggtacaaattcgccaacacgttcctgatctgggagtgccacccgtactggatgaagctg
aaggagatcgtgaacctcatcgtcatggatccyttcgtggatttggccatcaccatctgc
atcgtgctcaacactttgttcatggccatggagcaccaccccatgacccccgagttygag
cacgtgctctccgtgggcaatctggttttcactgggattttcacggcagaaatgttcctg
aagctcattgcaatggatccatattattactttcaagaaggctggaacatctttgatggg
ttcattgtgtccctgagtttaatggagctgagcctggcggacgtggaagggctttccgtg
ctgcgatctttccgattgctgagagtcttcaaactggccaagtcctggcccaccctgaac
atgctgataaaaatcattggcaactcggtgggtgccttggggaacttgaccttggtgctg
gccatcatcgtgttcattttcgccgtggtggggatgcagctcttcggcaaaaactacaag
gagtgtgtctgcaagatcaatccggactgtgagctaccccgctggcacatgcacgatttc
ttccactccttccttattgtcttccgtgtgttgtgtggggaatggattgagaccatgtgg
gattgtatggaagtggcgggacaggccatgtgcttgattgtcttcatgatggtcatggtc
atcggaaatttggtggtgctgaacctgttcctagccttgctgctgagctccttcagcgcc
gacaacctggcggccacggacgacgacggcgagatgaacaacctgcagatctcggtgatc
cgcatcaagaaaggcatcgcctggaccaaggccaaggtgcgcgagttcatgcaggcgcac
ttcaaacagcgcgaggccgacgaggtgaaacccctggacgagctctacgacaagaaggtg
aactgcatcgccaaccacaccggcgccgacatcaaccgcgacatcgacttccagaagaac
ggcaacggcaccaccagcggcatcggcagcagcgtggagaaatacatcatcgacgaggat
cacatgtccttcatcaacaaccccaacctgaccgtgcgcgtccccatcgccgtgggcgag
tcggatttcgagaacctcaacacggaggatttcagcagcgacacggatcccgacggcagc
aaagagaaactcgacgagaccagctcctctgagggcagcaccatcgacataaagcctgag
gtggaagaagtgcccgtggaggcaccggaggagtacctggaccccgatgcctgcttcact
gagggttgcatgcagcgytgcaaatgctgtcaggtcaacatcgaggaggggttgggaaaa
tcctggtggaccttgaggaaaacgtgtttcctgatcgtggagcacaactggtttgagact
ttcatcatcttcatgatcctcctgagcagcggggccctggctttcgaggatatttacatc
gagcagaggaaaaccatccgcaccatcctggagtaygccgacaaggtgttcacctacatc
ttcatcctggagatgctgctcaagtggtgcgcctacggcttcgtcaagttcttcaccaac
gcctggtgctggctggatttcctcatcgtggctgtctctttagtcagccttatagctaat
gccctgggctactcggaactaggtgccataaaatcccttaggacactaagagccttgagg
cctttaagagcgttgtcccgatttgagggcatgagggtggttgtcaatgccttggttggc
gctatcccttccattatgaatgtcttgttggtctgccttatcttctggctgattttcagc
attatgggggttaacctgtttgccgggaaatatcattactgctttaatgaaacagctgag
catcgctttgagatagatgttgttaacaacaagaccgactgcgaagctctgatgccgccc
aactccacggagatccgatggaagaatgtgaaaattaactttgacaacgttggggcagga
tatctggctctgctgcaagttgctacattcaagggctggatggacatcatgtacgcagct
gtagattccagaaagcaagaagagcagcccaagtacgaggacaacatttacatgtacatt
tatttcgttatcttcatcatcttcggttcctttttcaccctgaacttgttcatcggtgtc
atcatcgacaacttcaaccagcagaagaaaaagtttggaggtcargatattttcatgacg
gargagcagaagaaatattacaaygccatgaaaaaactgggctccaagaagcctcaaaaa
cccattccccgacccctgaaccgcatccaaggcgccgtcttcgactttgtcacccagcaa
gccttcgacatcgtcatcatgatgctgatttgcctcaacatggtgaccatgatggtggag
acagacacccagagcaagcagatggaggacatcctttactggatcaactttgtgtttgtc
atcttcttcacctgtgagtgtgtgctgaagatgttcgccttgcggcactattatttcacc
atcgggtggaacatttttgacttcgtggttgtgattctgtccatcgtgggaatgttcctg
gccgaaatcattgagaagtacttcgtgtcgcccacgctgttccgcgtgatccggctggct
cgcatcggccgcatcctgcgattgatcaaaggggccaaagggatccgcacgctgcttttt
gccttaatgatgtccctgcctgccttgttcaacatcggcctcctgctcttcctggtcatg
ttcatcttctccatcttcggcatgtccaacttcgcctacgtcaagcacgaggccggcata
gacgacatgttcaactttgagacctttggcaacagcatgatctgcttgttccagatcacc
acgtcggcrgggtgggacgggctcctgctgcccatcctgaaccggccgccmgactgcgac
ctggacaaggagcacccggggagcggctttaagggggattgcgggaacccttcggtgggg
atatttttctttgtgagttacatcatcatctccttcctgatcgtggtcaacatgtacatc
gccatcatcctggagaacttcagcgtggccacggaggagagcgcggacccgctcagcgag
gacgacttcgagacgttctaygagatctgggagaagttcgaccccgacgccacgcagttc
atcgagtacagcaagctggcggacttcgccgacgctctggagcatccgctgcgcgtcccg
aaacccaacaccatcgaactgatcgccatggacctgcctatggtaagtggggacaggatc
cactgtttggacatcctgtttgccttcaccaaacgtgtcctgggggacagcggggagctg
gacatcctgaggcagcagatggaggagaggttcgtggcgtccaacccttccaaagtgtct
tacgagcccatcaccaccacgctgcggcgcaagcaggaggaggtgtcggcggtggtgatc
cagagggcttacagggctcgcttggcacggcggggcttcatcagccgacggcccgcgtcc
accaaactggagaacgggggagcaaaccgggagaaaaaggaaggaaccccatccacggcg
tccctgccgtcctacgacagcgtcaccaaacccgagaaggagaaacagcagcgggcggag
gagggcaggmgagaaaaggcaaagagacaaaaagacaccagggaatccaagtgttga
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integrated database retrieval system
