Malurus melanocephalus (red-backed fairy wren): 130587595
Help
Entry
130587595 CDS
T09178
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04140
Autophagy - animal
mmea04148
Efferocytosis
mmea05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130587595 (VPS16)
04148 Efferocytosis
130587595 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130587595 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130587595 (VPS16)
Membrane trafficking [BR:
mmea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130587595 (VPS16)
Hops complex
130587595 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
130587595
NCBI-ProteinID:
XP_057244559
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
PTQTPPGLSPSAGPFLHMAVSFTHRHLALFSESGTVWMGMASLKEKFCEFSTGIRSPPKQ
MVWCTRPRSRQRAVVLAWDRQLMVVGNSSECIRYPLGKGNPPGAAATSSVTHTGVLGVPL
ASQEIFRIASMAPGALLLEAQKEYEKESQKADEYLREIREQQLLPEAVGQCIEAAGYEHE
PETQKSLLRAASFGKCFLDKFPPEGFVRMCQDLRVLNAIRDYQIGIPLTFTQYKQLTIEV
LLDSGPEGTQTGHPGVTPLSPAQLLEYEPRSGEQVPLLLKMKRSKLALGKAIESGDTDLG
SHLGNDVSMCCVRAVSMPCPCHVRAVSQRIEGRVAALQNALDEFYKAKNDFAAKATEEQI
KLLRLQRHLQEDLDKPYLDLSLHDTVSTLILDGHHKRAEQLYRDFKIPDKRYWWLKINAL
ATRGDWEEMEKFSKSKKSPIGYLVRASPAGGQQPPLHCPSILFLPSPALPSSSFHPLPLL
SNPAILFLPIPVLPSPSSPLQPSHPLSLHSHLTILFLPIPALLSCSSSLSPAILFLPSSS
SPFQLSHPF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
cccacacagaccccccctgggctgagcccctcggcggggccgttcctgcacatggctgtg
tccttcacccaccgacacctcgcgctcttctccgagtctggcaccgtctggatggggatg
gcctcgctcaaggaaaaattctgcgagttcagcaccggcatccgctccccgcccaagcag
atggtttggtgcacgcggccccgcagccggcagcgagccgtggtgctggcctgggaccgg
cagctgatggtggtgggcaattcctcggagtgcatccggtatcctttgggaaaagggaac
cctcctggtgctgctgccacctcctctgtcacccacaccggtgtcctgggtgtccccttg
gccagccaggagattttccggatcgcctccatggctccgggcgctctgctsctcgaggca
cagaaggaatacgagaaggagagccagaaagccgatgagtacctgcgggagatccgggag
cagcagctgctgcccgaggccgtgggccagtgcatcgaggctgcgggctacgaacacgag
ccagagacacagaaatccctgctgagggcggcttcgtttgggaagtgcttcctggacaar
ttccccccggagggtttcgtgcgcatgtgccaggacctgcgggtcctcaacgccatccgt
gactaccagattggcatcccgctgaccttcactcaatacaaacagctcaccatcgaggtg
ctgctggacagtggcccagaggggacacagacaggccaccctggggtgacacccctgtcc
cctgcacagctcctggagtacgagccccgctccggggagcaggtgccgctgctgctgaag
atgaaacggagcaaactggccctgggaaaagccatcgagagtggggacaccgacctggga
tctcacctgggaaatgacgtgtccatgtgctgtgtccgtgccgtgtccatgccatgtccg
tgccatgtccgtgccgtgtcccagcggatcgaggggcgcgtggcagccctgcagaacgcc
ctggatgagttctacaaagccaagaacgactttgctgccaaggccactgaggagcagatc
aagctgctgcggctccagcggcacctgcaggaggacctggacaagccctacctggacctg
tccctgcacgacaccgtctccaccctcatcctggaygggcaccacaaacgcgccgagcag
ctctaccgggacttcaagatcccggataagaggtactggtggctgaagatcaacgccctg
gccacccgtggggactgggaggagatggagaagttctccaagagcaagaagtcgcccatc
gggtacctggtgagagcttctcctgctggggggcagcagcctcctctccactgtccttcc
atcctcttcctcccctctccagccctgccatcctcatccttccatccccttcctctcctc
tccaaccctgccatcctcttcctccccattcctgttctaccatccccttcctcccctctc
cagccctcccatcccctttctctccattcccacttaaccatcctcttcctccccattcca
gctctcctctcctgttcctcttctctcagccctgccatcctctttcttccatcctcttcc
tccccattccagctctcccatcccttttaa
DBGET
integrated database retrieval system
