Malurus melanocephalus (red-backed fairy wren): 130588893
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Entry
130588893 CDS
T09178
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04510
Focal adhesion
mmea04512
ECM-receptor interaction
mmea04518
Integrin signaling
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130588893 (COL6A3)
04518 Integrin signaling
130588893 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130588893 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130588893 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmea04147
]
130588893 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
mmea00536
]
130588893 (COL6A3)
Exosome [BR:
mmea04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130588893 (COL6A3)
Glycosaminoglycan binding proteins [BR:
mmea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130588893 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
130588893 (COL6A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Motif
Other DBs
NCBI-GeneID:
130588893
NCBI-ProteinID:
XP_057245879
LinkDB
All DBs
Position
Unknown
AA seq
2196 aa
AA seq
DB search
MRKHRHLPLVAMFCVLFSGFGSVGAQQQAAQESADLIFLIDGSNNIGGVNFPAIRDFLVN
LIETLRVGAQQIHIGVVQYSDQPRTEFALNSYSTKADVLDAVKALSFRGGEEANTGAALE
FVVENLFTQAGGSRIEEAVPQILVLISGGESSDDIREGLLAVKQAGIFSFSIGVLNADSA
ELQQIATDGSFAYTALDIHNLDALQELLLPNIVGVAQRLILLAAPTIVTEVIEVNKKDIV
FLIDGSTALGAAPFNAIRDFVAKIVQRLEVGPDLIQVAVAQYADTVKPEFYFNTHQTRKD
VMANVRKMKLMGGTTLNTGSALDFVRTNFFTSAXGCRINEGVLPMLVLITGGKSRDSILE
AAAEMKRNRIVTLAIGSRNADLAELEEIAHERDFVFNPNDFRLQFMQAILPEVLSPIRTL
SGGLIVPEPPSVQVTKRDIIFLLDGSLNVGNANFPFVRDFVATLVNYLDVGSDKIXVGLV
QFSDTPKTEFSLYSYQTKSDIIQRLGQLRPKGGSVLNIGSALNFVLSNHFTEAGGSRINE
QVPQVLVLVTAGRSADPFLQVSNELTRAGVLTFAVGVRSADKAELEQIAFNPRMVYFMDD
FSALAALPQELNKPITTYVSGGVEEVPLAPTESKKDVLFLIDGSANLLGSFPAVRDFVHK
VISDLNVGSDATRVAVAQFSDTIQIEFDFAEYSSKQDMLVKVKRMKIKTGKQLNIGAALD
EAIRRLFVKEAGSRIEEGVPQFLVLLVAGRSTDSVEEPSDVLKHAGVVTFGIKAKNADPV
ELERIVYAPQFLLNAESLSRISELQPSIVNLLRTVQLQPTVERGEKKDVVFLIDGSDGVR
RGFPLLKTFVQRVVESLDIGRDKVRVAVAQYSDSIKPEFLLDAHEDKADVIGAIQQLEVM
GGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGTV
PFGIGIGNADLTELQTISFLPDFAISVPDFSQLDSVQQVVSNRVIRLTKQEIESLAPDLV
FTSPSPAGVKRDVVFLVDGSRYAAQEFYLVRDLIARIVNNLDVGIDTTRISVVQFSEHPH
VEFLLNTHSTKDEVQSAVRQLRSKGGQLVNVGEALEFVAKTIFTRPSGSRIEEGVPQFLV
ILSSRKSDDDFEXPSLQVKQVGVAPMMIAKNVEAEEMIQISLSPEYIFQVSSFQELPSLE
QKLLTPIETLTVDQIRRLLGDVQPPIDVSGDEKDIVFLIDSSDSVRPDGLAHIRDFISRI
VQQLEVGPNKVRIGVVQFSNNVFPEFYLKTHKSKNAILQAIRRLRLRGGSPLNAGKALDY
VVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDDVNRPANVITSTNIKPLGVGARNVDRDQ
LQIITNDPGRVLVVQDFTGLSTLEKRVQNILDELPIPATDSPIPFPPGGKKQADIVFLLD
GSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQVGLAQYNSDVTDEFFLKDHSTKAQILDA
INKVIYKGGRVANTGAAIRHIQERHFVKEAGSRIDQRVPQIAFVVTGGKSMDDGPGASAE
IAKKGVKVFAVGVRNIDLKEVSQLASESAMSFRASTAQELSELNEQVLVTLEAAMEERLC
PGPTDVTRDCDLDVIIGFDVSDVGPGQNIFTSQRGLESRVESVLNRLTQMQKISCTGNQA
PNVRVAIMAQAQGGPVEGLDFSEYRPELLERFLDMRTRGPYVLTADTLRSYLSKFRSSPA
GSTKVIIHFTDGVDQPINQLEAASSTLHAEGVNXLIFVGLDRVTNFDRVMQLEFGRGFTY
NRPLRVNLLDLDFELAEQLDNIAERTCCKVPCKCSGQRGDRGVPGPIGPKGVTGDLGYGG
YPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKGSRGFPGEKGELGEMGLDGIDGEEGDKG
LPGSSGEKGYSGRRGDKGVKGERGERGDRGLRGDPGDSGADNTQRGSRGQKGEIGPMGDP
GPAGLEGQDGGVGRRGMAGRRGPIGVKGTKGAPGQAGPAGEQGMRGPQGPPGQVGTPGIR
GEQGVPGPRAGTGPPGPPGERGRIGPMGLKGEPGNPGPKGPNGQPGPRGELGDDGRDGIG
GPGPKGRKGERGFVGYAGPKGGPGDRGVAGGPGPKGNRGRRGNAGAPGTPGQKGEIGYPG
PSGLKGEQGESRDQCALVRNIKDKCPCCYGKSHSGL
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgccccttgtggcaatgttttgcgtcctgttctcaggcttt
ggctcggttggtgcccagcagcaggcagctcaagagtctgctgaccttattttccttatt
gacggatcaaacaacatcggaggtgtcaattttccagccatacgcgatttccttgtaaat
ttgattgaaaccctcagagttggagctcagcagatacacattggggtggtgcagtatagt
gatcaacccagaaccgagttcgctttgaacagctactccacaaaagcggatgtcctggat
gccgtgaaggcactcagcttccgcgggggmgaggaagcgaacaccggtgcggcactggag
tttgtggtggagaacctcttcacccaggcgggaggcagcaggatagaggaagcggtgcct
cagattttagtgctgataagtggtggagagtctagtgatgatatccgagagggcttgtta
gcggtgaagcaagctggtatattttcatttagcattggggtcctgaatgctgacagtgca
gagctgcagcagattgctactgatggaagcttcgcctatactgccctggatatccataac
cttgatgctcttcaagaattattactgcccaacattgttggagtggcccaaagactcatt
ttgttagcggccccaaccattgtgactgaagttattgaagtgaacaagaaggatatagtc
ttcctgatagatggctcaactgctttgggggccgccccctttaacgcaattcgtgatttc
gttgccaaaattgtccaaaggcttgaggttggacccgacttgatccaagtggcggtagcg
cagtacgcagacaccgtgaagccagagttttattttaacacccaccagaccaggaaggat
gtgatggccaatgtgaggaagatgaagctcatgggtggcacgacactcaacaccggctcg
gcactggactttgtaaggaccaacttcttcaccagtgctkctgggtgcaggatcaatgaa
ggggtgctccccatgctggtgctcatcactgggggtaagtccagggattctattttggaa
gctgcggcagagatgaaaaggaaccggatagtgacccttgccattgggtcgagaaacgcc
gacctggcagagcttgaagaaattgcccatgaaagagattttgtgttcaacccaaatgac
ttccgccttcagttcatgcaagccatacttcctgaagtgctgtcacctatccggacactc
tctggaggactgattgtcccagagccaccatcagttcaagtaaccaaaagggatatcatc
tttcttttggatggatcactcaacgtcggaaatgccaacttcccctttgtgcgggacttt
gttgccaccctagttaactaccttgatgtcggcagtgacaaaatccragttggtttagtg
caatttagtgacactcccaaaaccgagttctccctgtactcctaccaaaccaaatcagac
ataatccagcgtttggggcagctgaggcccaagggggggtcggtgctgaacatcggctcc
gcactgaactttgtgctctcaaatcacttcacggaggctggtgggagcagaataaatgaa
cargtgccccaggtcctagtcctggtgacggcagggaggtctgccgatcccttcctccaa
gtttccaatgaattaactcgggccggagtgctgacttttgctgtcggcgttaggagtgcg
gataaggcagaacttgaacagattgcctttaatccaagaatggtgtattttatggatgat
ttcagtgctctggcagctttaccccaggagctaaataagcctataacaacatatgttagt
ggaggtgtggaagaggttccactcgccccaacagaaagcaagaaagatgttttattcctg
attgatggctcagccaacctcctgggcagctttcctgccgtccgggattttgtacacaaa
gtcatttctgacctgaaygtgggttccgatgccacacgagtcgctgtagctcagttcagt
gacaccatccaaattgaatttgactttgctgaatactcatccaagcaagatatgcttgtc
aaagtgaaaaggatgaagattaaaactgggaagcaactgaacattggagctgcacttgac
gaagccataaggaggctgtttgtgaaggaagctggaagcaggattgaagaaggggttcct
cagtttttggtcctccttgttgctggaagatcaaccgacagtgtggaggagccatcagat
gttctgaagcacgctggagttgtaacctttggcatcaaagcaaaaaatgctgaccccgta
gagctggaaaggattgtttacgccccacaattccttctgaatgctgaatccctctcacgg
atttcagagcttcagccaagcatagtcaacctgttgagaacagtccagcttcagccaaca
gttgagagaggtgagaagaaggatgtggtgtttctaatcgatggctcggatggtgtcaga
agaggtttccctctcttgaagacatttgtccaaagagtagtcgagagcctggacatcggc
cgtgacaaggtgcgagtggctgtcgcacagtacagcgactccataaagcccgagttcttg
ctcgacgcccacgaggacaaagcagatgtcatcggcgccatccaacagctggaggtcatg
ggaggctctcctctgaacactggggcagccctcgactatctcatcaagaatgtgtttacg
gtgtccagcggcagcaggatagcrgaaggcgtcccgcagttcctgatcctgctgactgcc
gaccggtcccaggatgatgtcaggagaccttcggtggtcctgaagacaagtggcacagtg
cccttcggcattgggatcggaaatgccgacctcacagagctacagaccatttccttcctc
ccagattttgctatctctgtgcctgacttcagccaactggattcggtgcagcaggtcgtc
tccaacagagtcatccgtctgaccaagcaagaratagagtcacttgcccctgacctggtt
tttacttcacccagcccagcgggtgtgaagagggacgtggtgttcctggttgatggctcc
cgctacgccgcccaggagttctacctcgtccgcgacctcatcgcgaggattgtgaacaac
ctggaygtgggcatcgacaccaccaggatttcggtggtgcagttcagcgagcacccccac
gtggagttcctgctcaacacccactccaccaaggacgaggtgcagagcgccgtgaggcag
ctgcggtccaagggcggccagctggtgaaygtgggcgaggccctggagttcgtggccaag
accatcttcacccggccctccgggagccgcatagaggagggcgtcccacagttcttggtc
atcctctcctcccgcaagtccgacgatgactttgagyatccatccctccaagtcaagcaa
gtgggtgtggcacctatgatgatagccaagaacgtggaagctgaggagatgatacagatc
tcacttagtcctgaatatatattccaagtctccagcttccaggaaytgcccagcctcgag
cagaagctgctgactccaattgaaaccctgaccgtggaccaaatcaggcggctgctggga
gatgtgcaaccccccatagatgtttctggagatgagaaggacatagtcttcctcattgac
agctccgacagcgttaggccagacgggcttgctcacattcgggatttcatcagcagaatt
gtccagcagctggaagtggggccaaacaaagtgcgaattggggtggtgcagttcagcaat
aacgtcttccctgagttctacctgaagacccacaagtccaaaaacgccatcctgcaggcc
atccgccgcctgaggcttagaggggggtcccccctgaacgctggcaaagccctggactac
gtggtaaagaactacttcatcaagtctgcggggagcaggatagaagacggagtgccccag
cacctggttgtcatcctyggagaccggtcccaggatgatgtgaacagacctgccaatgtg
atcacttccacaaacatcaaacctctgggtgtcggagccaggaatgtggacagagaccag
ctgcagatcattaccaatgatcctgggcgcgtgcttgtggtgcaggacttcacgggactc
tcaaccttagaaaagagggtgcagaatattcttgacgagctcccaattcctgcaacagac
tcacctataccattcccacctggaggtaagaagcaggctgacatcgtgtttttgctggat
ggctccatcaatctggggagggacaacttccaagaagttctccagtttgtctactctgtg
gtggacgccatctacagggatggtgactctatccaggtaggactggcccaatacaactcr
gatgtcaccgatgagtttttcctcaaggaccactccaccaaagcccagattttagacgcc
atcaacaaagtcatctacaaaggcgggcgagtggcgaacactggcgcagccatcaggcat
atccaggaaagacactttgtgaaggaagccggcagccggattgatcagagggtgccccag
atcgccttcgtcgtcacgggtgggaagtccatggatgatgggccaggggcctccgcagaa
attgcgaagaaaggcgtcaaggtgtttgcagttggtgtgaggaacatcgacctgaaggaa
gtcagccagttggccagtgagagtgccatgagtttcagagcatccacagctcaggagctg
tcagagctgaatgagcaggtcctggtcacgctggaagctgccatggaggagagactgtgc
ccaggaccaacagatgtgacaagggattgtgacttagacgtgataattggctttgatgtc
tcggatgttgggcctggccagaatatattcacttcccagcgaggtctggagtccagagtg
gagtctgtgctgaacaggctaacacagatgcagaagatcagctgcactggtaaccaggca
cccaatgtcagggtggccatcatggcccaggcccaggggggacccgtggaggggctggac
ttctctgagtaccggcccgagctcttggagaggttcctggacatgcggacccgtgggccc
tacgtcctcacagctgacacgctcaggtcctacctcagcaaattccgatcctcacccgct
ggcagcaccaaggtcataatccattttactgatggtgttgatcagccaataaatcagctg
gaggctgcttcatctactttacacgcagaaggagtcaatgstctcatcttcgtcgggctg
gaccgagtgaccaacttcgacagagtgatgcagctggagtttggccgcgggttcacctac
aacagaccactcagagttaatctgctggacttggacttcgagctggcagagcagcttgac
aacattgcagagaggacgtgctgcaaggtcccctgcaagtgctcaggacagagaggggac
agaggtgtgccaggccccataggaccaaagggtgtcacaggggatcttggctacggaggc
taccctggcgacgaaggagggccgggtgagcgtgggcctccaggtgtgaayggcacacaa
ggtttccagggatgccccgggcacagaggaacaaagggttctcggggattcccaggagag
aagggtgaactgggagaaatgggtctggatggcattgatggagaagagggagacaagggt
ttgcctggctcctctggagagaaaggatattctggcaggaggggagataagggagttaag
ggtgaacgaggagaacgaggcgaccgtgggctccgtggagatccgggagattcaggagct
gataatactcaacgaggctccagaggacagaagggtgaaattggaccaatgggagatcct
ggaccggcagggctggagggtcaagayggtggagtcggcaggaggggcatggcaggacga
aggggacccataggggttaagggcaccaagggcgcgcctggtcaagcagggccagctgga
gaacaaggcatgcgagggccacagggtccacctggccaagttggcacgccaggcatcaga
ggagagcagggtgtccctggacccagggctgggactggacctccaggacccccaggagaa
cgtggcaggattggtcccatgggactcaagggtgaacctggaaaccctggacctaaaggg
ccgaatggacagccaggcccacgaggagagctgggtgatgatggacgagatggaattggt
ggcccaggtcctaagggcagaaagggagaacgtggcttcgtaggctacgcagggcccaag
ggtggacctggtgaccgcggtgttgctggaggccctggccccaaaggaaacagaggccgc
aggggaaatgcaggggcacctgggacacctggtcagaaaggagagattggataccctggg
ccatctggccttaaaggcgagcaaggagaatccagagatcaatgcgcgctggtgcggaac
atcaaagacaaatgtccttgctgctatggtaagtctcattcaggcctttaa
DBGET
integrated database retrieval system
