Malurus melanocephalus (red-backed fairy wren): 130589210
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Entry
130589210 CDS
T09178
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04512
ECM-receptor interaction
mmea04514
Cell adhesion molecules
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130589210 (SDC1)
04514 Cell adhesion molecules
130589210 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130589210 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130589210 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mmea04090
]
130589210 (SDC1)
00535 Proteoglycans [BR:
mmea00535
]
130589210 (SDC1)
Membrane trafficking [BR:
mmea04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
130589210 (SDC1)
CD molecules [BR:
mmea04090
]
Proteins
130589210 (SDC1)
Proteoglycans [BR:
mmea00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
130589210 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
130589210
NCBI-ProteinID:
XP_057246434
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MINVVAVWLVALCFQAAVPQTTNLNLPPDDLDSSGDEDDTFSGSGAGPLTDQSRTWRTPG
GLTNSSAPATPVDFSEQPLPGIESRTEKEAPSPSTTSNLVTEEPVVAVKDEGPILGSPDG
RPTSHTVTTTARSPTAHFPSVXHVTPSEASAVVHELEPEMPSSAVPDTKDVPEPRSTAHH
EGDIAATPAAIAPEEVVPTREEVSEDGSGDPGDFILTKDEDLXPTQNSEVLADFERNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgtggtggccgtgtggctggtggccctttgcttccaggctgctgtcccgcaa
actacaaatctgaaccttccccctgaygaccttgattcatctggtgatgaagatgacaca
ttctcaggttcaggtgcaggtcccctgactgaccagtctcgcacctggagaaccccagga
ggactgactaattcctcagcaccagcaacaccagtggatttcagtgaacagccacttcct
gggattgagagccgaactgaaaaggaagcaccatctccctctacaaccagtaatctggtg
acagaggagccagttgtagctgtgaaggacgaaggccccatcctgggctcacctgatggg
agaccaacaagccacacggtcacaacaacagcgagaagccccactgctcacttcccttct
gtggytcatgtaactccttcagaagcctcagctgtggtgcacgagcttgaacctgaaatg
cccagctctgctgtgccagacaccaaggatgtgcccgagccccgctctactgcccatcat
gagggtgacatcgctgccacccccgcagcgatagctccggaggaggtcgttcctacacgt
gaggaggtttctgaagatggctctggagacccgggagacttcatcttgactaaggacgag
gatttggyccccacgcagaactcagaagtactggctgactttgagaggaatgccaaagca
gcaggagcctcgggaattatggacaggaaagaagtccttggaggtgttattgctggagga
cttgtaggcttggtgtttgctgtgtttctagttgcatttatgctgtacagaatgaagaaa
aaagatgaaggcagctattcactggatgaaccaaaacagtctaacggaggataccaaaaa
ccacacaaacaagaggaattctatgcataa
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integrated database retrieval system
