Malurus melanocephalus (red-backed fairy wren): 130589210
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Entry
130589210 CDS
T09178
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04512
ECM-receptor interaction
mmea04514
Cell adhesion molecule (CAM) interaction
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130589210 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
130589210 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130589210 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130589210 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mmea04090
]
130589210 (SDC1)
00535 Proteoglycans [BR:
mmea00535
]
130589210 (SDC1)
Membrane trafficking [BR:
mmea04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
130589210 (SDC1)
CD molecules [BR:
mmea04090
]
Proteins
130589210 (SDC1)
Proteoglycans [BR:
mmea00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
130589210 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
130589210
NCBI-ProteinID:
XP_057246434
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MINVVAVWLVALCFQAAVPQTTNLNLPPDDLDSSGDEDDTFSGSGAGPLTDQSRTWRTPG
GLTNSSAPATPVDFSEQPLPGIESRTEKEAPSPSTTSNLVTEEPVVAVKDEGPILGSPDG
RPTSHTVTTTARSPTAHFPSVXHVTPSEASAVVHELEPEMPSSAVPDTKDVPEPRSTAHH
EGDIAATPAAIAPEEVVPTREEVSEDGSGDPGDFILTKDEDLXPTQNSEVLADFERNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgtggtggccgtgtggctggtggccctttgcttccaggctgctgtcccgcaa
actacaaatctgaaccttccccctgaygaccttgattcatctggtgatgaagatgacaca
ttctcaggttcaggtgcaggtcccctgactgaccagtctcgcacctggagaaccccagga
ggactgactaattcctcagcaccagcaacaccagtggatttcagtgaacagccacttcct
gggattgagagccgaactgaaaaggaagcaccatctccctctacaaccagtaatctggtg
acagaggagccagttgtagctgtgaaggacgaaggccccatcctgggctcacctgatggg
agaccaacaagccacacggtcacaacaacagcgagaagccccactgctcacttcccttct
gtggytcatgtaactccttcagaagcctcagctgtggtgcacgagcttgaacctgaaatg
cccagctctgctgtgccagacaccaaggatgtgcccgagccccgctctactgcccatcat
gagggtgacatcgctgccacccccgcagcgatagctccggaggaggtcgttcctacacgt
gaggaggtttctgaagatggctctggagacccgggagacttcatcttgactaaggacgag
gatttggyccccacgcagaactcagaagtactggctgactttgagaggaatgccaaagca
gcaggagcctcgggaattatggacaggaaagaagtccttggaggtgttattgctggagga
cttgtaggcttggtgtttgctgtgtttctagttgcatttatgctgtacagaatgaagaaa
aaagatgaaggcagctattcactggatgaaccaaaacagtctaacggaggataccaaaaa
ccacacaaacaagaggaattctatgcataa
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integrated database retrieval system
