Methylophilus medardicus: FIU01_01145
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Entry
FIU01_01145 CDS
T10472
Name
(GenBank) deoxyribodipyrimidine photo-lyase/cryptochrome family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mmec Methylophilus medardicus
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmec03400
]
FIU01_01145
Enzymes [BR:
mmec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FIU01_01145
DNA repair and recombination proteins [BR:
mmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FIU01_01145
Prokaryotic type
FIU01_01145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QDC43264
UniProt:
A0A5B8CPV0
LinkDB
All DBs
Position
247695..249362
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AA seq
555 aa
AA seq
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MQATTMWIWSPSWQGRFAVAARCWTISRSGCGNMAADALHVVWFKRDLRVADHAALAAAC
AAGKVLPLFIWAPQVWAAEDANLSQAMFVRECLQALASSLHDLGLHLHVYHHDPLSLLKR
LHEKFRIAALYSHEETGNDVTFQIDTQIQRWCMAQSIPWHEWPQHGVVRRLADRRRWQSQ
WELRMQQTPIAIPPVSAGERLPHHGLDRLPVVAGIDQAGRQHGGIGVADAVMTDFLQRRV
QRYQSGLSSPLTAPQACSRLSPYLAWGALSLRSLVQASRAASQANEAMHWRRNLHRFESR
LHWHCHFMQKLESEPRIEFESFYPGFEQLQHRLTDATRMTRLQAWQSAQTGWPLVDACMA
MLNQTGWLNFRMRAMLMSTASYLLRLPWRQSGSHLARMFLDYEPGIHWPQVQMQSGTTGI
NALRIYHPVKQALAQDPLGQFVRQWIPALRQVPDSWVLEPWRMPHALQLHYGCVIDRDYP
SPLVDVVSAMQAAKQDWFEIRKQMQTAVVQDILQRHASRQSRHFPKVARSHTRRKSAPTS
EATALPPVTQLSLLF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctacgaccatgtggatatggtcgccaagttggcaaggccgtttcgcagtcgca
gcccgctgctggacgatatcacggtctggatgcggcaatatggcggctgacgctttgcat
gtggtttggtttaaacgtgatttacgcgtggcggatcatgcggcgcttgctgccgcttgt
gcggcgggcaaagtgctaccactgtttatttgggcgcctcaggtatgggctgccgaagat
gccaacctcagtcaggccatgtttgtgcgtgagtgtctgcaagcgcttgcttcttcattg
catgatttaggcttgcacttacatgtgtatcaccacgatcctctcagtctactcaaacgt
ctgcatgagaaatttcgcatcgccgcgctctacagccacgaggagacgggcaatgatgtg
acgtttcagatcgatacgcagattcagcgctggtgcatggcgcaaagcattccttggcat
gaatggccgcagcacggggttgtcaggcggttggccgatcgtcgccgctggcagtcacaa
tgggagttacgcatgcaacaaacgcctattgcaatcccgccagtcagtgcaggtgagcgc
ttgccgcatcatgggctggatcgcttgcccgtggttgcggggatcgatcaagctggccga
caacacggcggtattggggtggctgacgcggtgatgactgactttttgcaacgtcgcgtg
cagcgttatcaaagtgggctctctagcccgctcacagccccgcaggcctgtagccgttta
tctccatatttggcttggggtgcgctgagtttgcgtagcttggtgcaggccagtcgtgcc
gcctcgcaagcgaacgaagccatgcattggcgacgtaatctgcaccgctttgaaagtcgt
ttgcactggcactgtcattttatgcaaaaactcgaaagtgagccgcgcattgagtttgag
agtttttatcctggttttgagcagttgcagcatcgcttaacggatgctacgcgcatgaca
aggttacaggcttggcaatcggcgcaaaccgggtggccgctggtagatgcctgtatggcg
atgcttaatcaaaccgggtggttgaattttcgcatgcgtgccatgctgatgagcaccgcc
agttatttgttgcgcttgccttggcggcaaagtgggtcacatctggcacgcatgtttctt
gattatgaaccgggtatacactggccgcaggtacaaatgcaatctggcaccaccgggatt
aatgctttgcgtatctatcatccagtcaagcaggcattggcgcaagatccgctggggcag
tttgtccggcaatggattccagcgctgcggcaggtgccagacagttgggtgctagaacct
tggcgcatgccacatgcgttgcagttgcattatggttgcgtcatcgaccgtgattatccc
agcccgttggtcgatgtggtcagtgccatgcaagcggccaagcaagattggtttgagatt
cgcaagcagatgcaaaccgcagtggtgcaggatattttgcaacgccacgcctcccgtcaa
tcgcggcattttcccaaggtggcgcgtagccacacccgccgcaagtcagcgcctaccagt
gaagccactgcgctacccccggttacgcaactttctttgttgttttaa
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