Methylophilus medardicus: FIU01_01825
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Entry
FIU01_01825 CDS
T10472
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmec Methylophilus medardicus
Pathway
mmec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIU01_01825 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmec03021
]
FIU01_01825 (rpoA)
03400 DNA repair and recombination proteins [BR:
mmec03400
]
FIU01_01825 (rpoA)
Enzymes [BR:
mmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIU01_01825 (rpoA)
Transcription machinery [BR:
mmec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIU01_01825 (rpoA)
DNA repair and recombination proteins [BR:
mmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIU01_01825 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QDC43384
UniProt:
A0A5B8CQ48
LinkDB
All DBs
Position
369071..370057
Genome browser
AA seq
328 aa
AA seq
DB search
MQNNPTDYLKPRVVDVEVINPLRARVTLEPMERGFGYTLGNALRRVLLSSIPGFAITEVK
IDGVVHEYSTIEGVQEDVVDILLNLKGVALKLHNKTETILVLNKSGEGIVTAGDFEVGHD
AEIVNPNHIIANITKGGKLHLEVKVEMGRGYQPVPARQKANDEDRVLGFMMVDASFSPIN
KVSYHVESARVEQRTDLDKLIMDVETNGIIEPEQAIRDAARILIGQLSVFANLEGASADV
EVKAAPQVDPILLRPVDDLELTVRSANCLKAENIFYIGDLIQRTENELLKAPNLGRKSLN
EIKDVLASKGLTLGMKLENWPPVGLEKA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaccctacagattatttgaagccacgtgttgtggacgttgaagtgattaac
ccactgcgtgcacgtgtcactttagagccaatggaacgcggctttggctataccttgggt
aatgcgttgagaagagttttactttcttccatccctggttttgccattactgaagtaaaa
attgatggtgttgtacatgagtactccaccattgaaggtgtacaagaagatgtcgttgat
atcttacttaacctcaaaggcgttgccttaaagctgcacaacaaaactgaaaccatttta
gtgttaaacaaatctggtgaaggcattgttactgctggtgattttgaagttggtcatgat
gctgaaatcgtgaatcctaaccacatcattgccaatatcactaaaggtggtaagttgcac
cttgaagtgaaagttgagatgggtcgcggttatcaaccagtgcctgcgcgtcaaaaggct
aacgacgaagatcgcgtccttggttttatgatggtcgatgcttcattcagcccaatcaac
aaggtgagctatcatgttgagagcgcgcgcgttgaacaacgtaccgatcttgacaagctg
atcatggatgttgaaacgaatggcatcatcgagcctgaacaggcgattcgtgatgctgcc
cgtatcttgattggtcagttatctgtgttcgcgaacttggaaggtgcttcagctgacgtc
gaagtcaaagcagcgccacaggtagaccctatcttgttacgtccagtcgacgacttggaa
ttaacagtacgttctgctaactgcctcaaagcagaaaatattttctacattggtgatttg
attcagcgcactgaaaacgaattgttgaaagcgcctaatcttggtagaaaatcattgaat
gaaattaaagatgtgttggcttctaaaggcttaacactgggaatgaagcttgagaactgg
ccaccagtcggtcttgaaaaagcttaa
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