Methylophilus medardicus: FIU01_02045
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Entry
FIU01_02045 CDS
T10472
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmec Methylophilus medardicus
Pathway
mmec03420
Nucleotide excision repair
mmec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIU01_02045 (uvrD)
03430 Mismatch repair
FIU01_02045 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmec03400
]
FIU01_02045 (uvrD)
Enzymes [BR:
mmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIU01_02045 (uvrD)
DNA repair and recombination proteins [BR:
mmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU01_02045 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FIU01_02045 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
AAA_22
DUF6866_C
Motif
Other DBs
NCBI-ProteinID:
QDC43424
UniProt:
A0A5B8CQ88
LinkDB
All DBs
Position
complement(414745..416925)
Genome browser
AA seq
726 aa
AA seq
DB search
MQADTQLLQGLNDKQLQAVTLPHVSALILAGAGSGKTRVLTTRIAWLIQTGQTSPMGLMA
VTFTNKAAKEMLTRLTSMLPINTRGMWAGTFHGLCNRMLRAHYREAGLPNTFQILDTADQ
LSAIKRVMKAMNVDDEKYPPKQVMGYINSCKEEGLRAEAVDAYDGHSQKLREIYAAYDQQ
CNREGVADFAELLLRCYELLEREPHIRAHYQQRFQYILVDEFQDTNRLQYLWLKLLGGAH
NSIFAVGDDDQSIYAFRGARVGNMSDFQREFNVQNIVKLEENYRSHSNILDAANAIITNN
RNRLGKNLWTSAGKGEPIRIYEAYNDTDEAQFIVDEVNMLQKEGVPLGDMALLYRSNAQS
RILEHTLFSANLPYRVYGGLRFFERAEIKHALAYLRLIANANDDTALLRIVNFPPRGIGA
RGLEQLQEAARQNECSLWQAATNKVGEGKLGSKGLDGFVALIRQLVDHAYGITLGEMAEL
VINLSGLMAHYQNDKEGEDRIENLQELVTAAVAFSNQDLGNHHNMDEDADLLTQFLNHAS
LEAGDHQADVGHEALQLMTVHAAKGLEFHSVFIGGVEEGLFPHEQAAYENGGLEEERRLM
YVAVTRARQRLYLTYAQSRMLHGQVRYGIASRFIDEIPAELTKRLNSKPVSKPYAAGGQY
NNPPTQSSSTQSNFPFKIGQSVRHGKFGEGVVVSYEGNANDLAIKVNFGSAGLKTLMLEY
AKLEKI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatactcaactccttcagggcctcaacgacaaacaactgcaagcggtcacc
ctgccgcatgtctctgcgctgattctggcaggtgccggcagtggtaaaacccgcgtgctg
actacccggattgcctggttaattcaaaccggacaaacatcacccatggggctcatggca
gtaacgttcaccaacaaggctgccaaagaaatgctaacgcgtttgaccagtatgctgcca
attaatacgcgtggcatgtgggcggggacttttcatggcttatgcaaccgcatgttgcgc
gcgcattatcgcgaggcgggtttaccgaacacgtttcagattctggataccgcagaccaa
ctctcggccatcaagcgcgtcatgaaggccatgaacgtggacgatgagaaatatccgccc
aaacaggtgatgggctatatcaacagttgtaaagaagaaggtttacgcgcggaggcggtg
gatgcttatgacgggcatagccaaaagttacgtgagatttatgccgcctatgaccaacaa
tgcaaccgtgaaggcgtcgctgattttgccgagctgttactgcgctgctatgagctgtta
gagcgcgagccgcacattcgtgcgcactatcagcagcgctttcaatacattctggtggat
gagtttcaagataccaatcgcctgcaatatttgtggctaaagttgctgggcggagcacat
aacagtatttttgcggtcggcgatgatgaccagagcatttatgcttttcgtggcgcgcgc
gtgggcaatatgagcgattttcagcgcgaatttaatgtgcagaatatcgtcaagcttgaa
gagaattaccgctcgcacagcaacatcctggacgctgccaacgccatcatcaccaataac
cgcaatcgccttggcaaaaacttgtggacctctgcagggaaaggcgagccgattcgtatt
tatgaggcatacaacgacaccgatgaagcgcaatttattgtcgatgaagtcaacatgctg
caaaaagaaggggtaccactcggcgatatggccctgctctatcggagtaatgcgcaatct
cgtattctcgaacacacgttgttttcagccaacctgccctatcgggtctatggcgggtta
cgtttttttgaacgcgccgaaatcaaacatgcgctggcctatttacgcttaattgctaac
gccaacgacgatacggccttattgcgtattgtgaattttccgccacgcggcattggcgcg
cgcggtttggagcagttgcaagaagctgcgcgccaaaacgaatgcagcttatggcaagcc
gccaccaacaaagtgggagaaggcaagctggggagcaaagggctcgatggctttgtagcg
cttattcggcagctggtggatcatgcctatggcattacgcttggtgagatggccgaattg
gtcatcaacctgagtggactgatggcgcattaccaaaatgataaagaaggcgaagatcgc
atcgaaaacttgcaagaactcgtcaccgccgctgtagcctttagcaatcaggatctgggc
aatcatcataatatggatgaagatgccgacttgttaacccaatttttgaatcacgccagc
ctagaagcaggcgaccatcaggcagatgtcgggcatgaagccttgcaattaatgacggta
cacgccgccaaaggcctggagtttcacagtgtatttatcggtggcgtggaagaaggttta
tttccacacgagcaggccgcttacgaaaatggcggattggaagaagaacgccgcctgatg
tacgtggcagtcacccgcgcgcgccagcgcctgtatctaacctatgcacaaagccgcatg
ctgcatggccaggtccgctacggcatcgcctcgcgctttatcgatgaaatccccgcagag
ctcaccaaacgcttaaacagcaagccagtgtctaagccttatgcagcaggcggccaatac
aacaacccaccaacgcaatccagcagcacgcaatccaactttccattcaaaattggccag
agtgtacgccacggcaaatttggcgagggtgtggtggtcagttatgaaggcaatgccaat
gatttggcaatcaaagtgaatttcggaagcgcgggcctcaaaacgctgatgctggaatac
gccaagctggaaaaaatatag
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