Methylophilus medardicus: FIU01_02760
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Entry
FIU01_02760 CDS
T10472
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mmec Methylophilus medardicus
Pathway
mmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU01_02760 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmec03019
]
FIU01_02760 (groL)
03110 Chaperones and folding catalysts [BR:
mmec03110
]
FIU01_02760 (groL)
03029 Mitochondrial biogenesis [BR:
mmec03029
]
FIU01_02760 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmec04147
]
FIU01_02760 (groL)
Enzymes [BR:
mmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FIU01_02760 (groL)
Messenger RNA biogenesis [BR:
mmec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FIU01_02760 (groL)
Chaperones and folding catalysts [BR:
mmec03110
]
Heat shock proteins
HSP60 / Chaperonin
FIU01_02760 (groL)
Mitochondrial biogenesis [BR:
mmec03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FIU01_02760 (groL)
Exosome [BR:
mmec04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FIU01_02760 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FIU01_02760 (groL)
Exosomal proteins of breast cancer cells
FIU01_02760 (groL)
Exosomal proteins of colorectal cancer cells
FIU01_02760 (groL)
Exosomal proteins of bladder cancer cells
FIU01_02760 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SAM_GIDA_C
Motif
Other DBs
NCBI-ProteinID:
QDC43557
UniProt:
A0A5B8CQQ8
LinkDB
All DBs
Position
complement(565735..567375)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVRFGDDVRQKMVNGVNVLANAVRVTLGPKGRNVVLERSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIIREGMKSVAAGMNPMDLKRGI
DKAVEAAVADLAAQSKPCTTSKEIAQVGAISANSDTSVGQIIADAMDKVGKEGVITVEDG
SGLTNELDVVEGMQFDRGYLSPYFINNPERQIALLDNPFVLLYDKKISNIRDLLPTLEQV
AKAGRPLLIIAEDVDGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEVGLKLESVQLHDLGQAKRIEVGKENTIIIDGAGNEDAIKARIGQIKTQIEEASSDY
DREKLQERVAKLAGGVAVIKVGATTEIEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARDAIAKVKGDNLDQDAGIKIVLRAVEEPLRQITQNAGVEPSVVVNNVAAGKGNYGYNA
ANETYGDMVEMGVLDPTKVTRSALQNAASVAGLMLTTDCMVAELPKEDAPAMGGDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaagatttggtgatgacgttcgccaaaaaatggtaaatggtgtc
aatgtattggccaacgcagtgcgcgtaactttgggccctaaaggccgtaatgtggtgttg
gagcgttcatttggtgcgccaaccatcactaaggatggtgtttctgtcgctaaagagatc
gaattgaaagataaattcgaaaacatgggcgcacagatggtgaaagaagtagcctcaaaa
accaacgatatcgctggtgacggcacaacaaccgcgacagtattggcgcaagcgattatt
cgcgagggcatgaagtctgtggctgcgggtatgaacccaatggatctgaaacgcggcatc
gacaaagcagttgaagcagctgtagcggatctggctgcacaatctaagccctgtacaacc
agcaaagaaatcgcgcaagtcggtgcgatctctgctaactctgacacttctgtaggccaa
atcattgctgatgcgatggacaaagtaggcaaagaaggtgtgattacggttgaagacggt
tcaggcttgaccaacgagctggacgtggttgaaggcatgcagtttgaccgtggttatttg
tcaccttacttcatcaacaatccagagcgccaaatcgcgttgctggataacccgtttgtg
ttgttatacgacaaaaaaatctccaacatccgtgatttgttgccaacactggagcaagtt
gcaaaagccggtcgcccattgttgatcattgctgaagacgtagatggcgaagcgttggca
acattggttgtaaacaacattcgtggcatcttgaaaaccactgctgtgaaagcgcctggt
tttggtgatcgtcgtaaagccatgttggaagacatcgctattttgaccggcggtactgtg
atttcagaagaagtcggcctgaaactggaaagtgtacaactgcacgatctgggtcaagca
aaacgcattgaagtgggtaaagaaaacaccatcattattgatggcgctggtaacgaagat
gcgatcaaggcacgtatcggccagatcaaaacacaaatcgaagaagcttctagcgactat
gaccgtgaaaaactgcaagagcgcgtggccaagctggctggcggtgttgctgtgatcaag
gttggcgcgaccactgaaatcgaaatgaaagagaaaaaagcccgcgtggaagatgcgtta
cacgcaacacgtgcagcggttgaagaaggtatcgtggctggcggcggcgtggcactgatt
cgtgctcgtgacgcaattgctaaagtgaaaggtgacaacctggatcaagatgctggtatc
aaaattgtgttgcgcgcggttgaagagccattgcgtcaaatcacacaaaacgctggcgtt
gagccatcagtggttgtgaacaatgtagcggctggtaaaggcaactacggttacaacgct
gccaacgaaacctatggcgacatggttgaaatgggcgtattggatccaaccaaagtaaca
cgttctgcgctgcaaaatgcggcgtctgtggctggcttgatgctgactactgactgcatg
gttgctgaactgcctaaagaagacgcaccagcaatgggcggcgatatgggcggtatgggt
ggcatgggcggtatgatgtaa
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