Methylophilus medardicus: FIU01_03220
Help
Entry
FIU01_03220 CDS
T10472
Name
(GenBank) PAS domain S-box protein
Organism
mmec Methylophilus medardicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
HATPase_c
Response_reg
PAS_9
PAS_4
MHYT
HisKA
PAS_3
Hpt
PAS_8
PDE8A_N
Receiver_CRE1
Motif
Other DBs
NCBI-ProteinID:
QDC43626
UniProt:
A0A5B8CRF7
LinkDB
All DBs
Position
662304..666149
Genome browser
AA seq
1281 aa
AA seq
DB search
MFLTNSPALALLFQGEYDFSLVMLSLFFAFFSTFPALMVINSIGPHTQKIARFLLTLLAA
LTMGVGIWATHFIGMVALKLPCSSSYQQVLTLLSMVPIVLASWTFLSFAKAKGTSGTPLY
SNALALGLGVASMHFIGMSAMRIEGTIYYAPLIFAAAIAGVLGFAYLALKCTVKLDMRKK
RHLLIVSLIIGLAVSILHYTAVFATYFVKGGILEAGAFSIYKNELKQIIINVLEFQGLSL
LIAYIYSLKKHVHGYQASEMELHSLVATIEDYAIIKLDKQGYIKTWNMGAQRIKGYAAEE
VIGKHFSLFYPADDIASGLVGRILQEACDQGKFEDEGLRVRKNGSMFYASVVIRPIWAAD
GSLDGFSKVTRDITERKQSQSSLHEKQQFISSITDAMREAVYALDKNGLLIFMNPEAEKI
LGWKLKELYGKSMHDTTHHLRVDGSTLPYEECIVRRAMLTGKSISSDDEVFITKDKIVLP
VAINASPLRNDNEIIGSVVIFRDIRREKLVEESLRENAARMRKLLEISPIAVRILSLGSN
KVIFANQSYAEMLSVDAESMIGTNPNGFYKYPDEYNQILAELSAGKSVINQLVELRSNQG
REIWVVASYYNIDYGGDRCILGWFYDVTELRQAKEIAEDAAKMKSEFLSTMSHEIRTPMN
GVIGMIDLLLDTPLDKEQANFATTIKECSYALLSILNDILDFSKIEAGKLEIVEQEFEVQ
PMVEACIDLFASKALEKNIQLISYIAPDVYPLLIGDSGRLRQIILNLLGNAIKFTASGMI
KLEVHVREDAHDHQAVYFEVSDTGIGLTPQVINKLFKPFTQADGSVTRKYGGTGLGLSIC
KRLLEAMHGNIGVESKPGAGSNFWFALPLKKGMQGLISSKDALINSQSLLVSSQPNVIKD
MLLKTIEHWGGNVDSMDSTTHMLDSLADVEAYDLLILLNPEAGFDLPALLAAIDAKQLTT
RVLVFSDDKSFAQIHYPKLYVSGLMPFKQTGVYGALVKALDRRKMDAPVHSERRRRAIQP
AVLPVVDKNILILLVDDNEVNRMVAERQLTKLGYAVDTAKDGLQALEKLQQQAYRLILMD
CQMPVMDGFEATRTIRKQEQGSGQHMPIVAMTANAMNGDREQCFEAGMDAYLTKPVNIQA
LQETLQKWIPENTHSDIEAVSPLLDPALEQLDIARLSALFDGDADEIKAILQAFLSSLPA
LSAELSDACSQADLDTIRKVAHHLYGAASNIGVNRIAKVCALIEERVSHQQVTQLDSLRT
LLTEETDQFATFIQAEFGVQP
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaaccaattcgcccgcgttagccctgctgttccaaggagaatatgatttttct
ttggtgatgctctcattgttttttgccttcttttctacctttccggccttgatggtcatc
aacagcattggtccccacacacaaaaaatagcgcgctttttgctgacactgctggccgcg
ctgacaatgggggtcggtatttgggccacccactttattggcatggtcgcgttaaagctg
ccttgttcgagcagttatcaacaagtgctcaccttactttctatggtgcctatcgtgcta
gcgagctggacgtttttatcgtttgccaaggccaaaggaaccagtgggactccgctctat
agcaatgctttggcgttgggcttaggggtggcaagtatgcacttcatcggcatgtctgcg
atgcggattgagggcacaatttattacgctcccttgatttttgcggctgccattgccggt
gtcttggggttcgcgtatctggcgctgaagtgcacggtaaagctggatatgcgcaaaaaa
aggcatttgttgatcgtcagtttaatcattgggcttgccgtctccatcttgcattacacc
gcagtgtttgccacttattttgtaaagggtggcattttagaggccggtgcattttcgatc
tataaaaacgagttaaaacaaatcatcatcaacgtgctcgagtttcaaggcttgtcgctg
ctgattgcctatatttactcactcaaaaaacacgtgcatggctaccaagccagtgagatg
gaattacattcgctagtggccaccattgaagattacgccattatcaaactggataagcag
ggttatattaaaacctggaatatgggagcacaacgcattaaaggctatgcggctgaggag
gtgatcggcaagcatttctcgttgttctatccggccgatgatattgcttctggtctggtg
gggcgcattttgcaagaggcttgtgatcaaggcaagtttgaggatgaggggttaagggtc
agaaaaaatggctctatgttttatgccagtgtggtgattcggccgatttgggctgccgat
ggcagcctcgatgggttttctaaagtcacgcgcgacatcaccgaacgcaagcaaagccag
tcctctttgcatgaaaagcagcaatttatttcgagtattaccgatgccatgcgcgaggcg
gtatatgcgctggacaaaaatggtctgctgatttttatgaatccggaagccgagaaaatt
cttggctggaaactcaaagagttgtacggcaaaagcatgcatgacaccacgcatcacctg
cgggtagacggcagtaccctaccttatgaggagtgtattgtcagacgggcaatgctcacc
ggtaagtcgattagttctgatgatgaggtctttatcaccaaagataagatcgtgttgcca
gtggcaatcaacgcctcacctttgcgcaatgataatgaaattattggcagtgtcgtcatt
ttcagagacattcgcagagaaaaattggttgaggaaagcctgcgtgaaaatgcagccaga
atgcgtaagctgctggaaatcagcccgattgcagtgcgtattttgtcactgggtagcaac
aaggtgatctttgccaatcaaagttatgcagaaatgttaagtgttgatgcagaaagtatg
attggcaccaatccaaatggcttttacaaatatcccgatgaatacaatcaaattttggct
gagctttctgccggcaaatcggtgatcaatcagctggtggagcttcggtctaatcagggc
cgtgaaatttgggtagtagcctcttattacaacattgattatggcggtgatcgttgtatt
ttgggctggttttacgatgtgaccgagttgcgccaagccaaggaaattgccgaggatgcc
gccaaaatgaaatcggagttcttgtccaccatgagtcatgaaatcagaacaccgatgaat
ggcgttatcgggatgattgatctgctattggataccccgctcgacaaggagcaggcgaat
tttgccaccaccattaaagagtgttcctatgcgctgttgagtattttgaatgacattctt
gatttttcaaaaattgaagcgggcaagcttgagattgttgaacaagagtttgaggtgcaa
ccaatggtggaggcatgtatcgacctcttcgctagcaaggcactggagaaaaatatccag
ctgattagttatatcgcgccggatgtgtatccgttattgattggcgacagtggtcgatta
agacaaattatcttgaatctgcttggcaatgccatcaagttcaccgcgtcaggcatgatc
aagctagaagtgcatgtgcgtgaggatgcgcatgatcatcaagccgtgtatttcgaagtg
agcgacaccggcatcggactgaccccgcaagtcatcaataaactgtttaaaccatttacc
caagcagatggatcggtgacgcgaaaatacggtggaactggacttggattgtcaatctgc
aagcgtttattagaagccatgcatggcaacatcggtgtagagagcaagcccggtgccggc
tccaacttctggtttgcactgccgttgaaaaagggcatgcaagggctcattagcagcaag
gatgcgctgattaacagccaaagtttgctggtgtcctctcagcccaacgtcattaaagac
atgctgctcaaaacgattgagcattggggcggcaatgtggacagcatggactcaaccacg
cacatgctggattcacttgccgatgtcgaagcctatgatttgcttattttgctcaatcca
gaggcaggctttgacctgccggccttgctcgccgccattgatgcgaaacaattaaccacc
cgtgtattggtgttcagcgatgataaatcgtttgcgcagattcactacccaaaactgtat
gtcagtggcctgatgccctttaagcagacgggcgtgtatggcgccttagtcaaagcgctt
gaccgcaggaaaatggatgcacccgtgcacagcgagcggcggcggcgggccatccagccg
gcggtgttgccggtggttgacaagaatatcttgattttgttggtggatgacaatgaggtc
aatcgtatggtggctgagcggcaattaacaaaattaggctacgccgttgatactgccaag
gatggtttgcaagccctagaaaagctgcaacagcaagcataccgtttgattctcatggat
tgccagatgccggtgatggacggatttgaagctacccgaaccatacgtaagcaagagcag
ggcagcggccaacatatgccgattgtggcgatgaccgccaatgccatgaatggtgacaga
gaacagtgttttgaggccggcatggatgcttatttgaccaaacccgtgaatattcaggca
ttgcaagaaacgctgcaaaaatggattcccgaaaacacgcactctgatattgaggctgtt
tcgcctttgctagaccccgccttggagcagctggatattgcgcgcctaagcgctttgttt
gatggggatgctgatgagatcaaggccattctgcaggcgtttttatcctccttgcctgcc
ttatccgctgagttgtctgatgcctgcagccaagcggatctagacaccatccgaaaagtg
gcgcatcacctatatggcgctgcctcgaatattggggtaaacagaattgccaaggtgtgt
gcgttgattgaggagcgggtttcccatcagcaagtcacgcagcttgatagcctgcggact
ttgttgaccgaagagacagaccagttcgcaacatttattcaagcagagtttggagtacag
ccatga
DBGET
integrated database retrieval system
