Methylophilus medardicus: FIU01_03980
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Entry
FIU01_03980 CDS
T10472
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mmec Methylophilus medardicus
Pathway
mmec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIU01_03980
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmec01007
]
FIU01_03980
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmec03016
]
FIU01_03980
Enzymes [BR:
mmec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FIU01_03980
Amino acid related enzymes [BR:
mmec01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FIU01_03980
Transfer RNA biogenesis [BR:
mmec03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FIU01_03980
Prokaryotic type
FIU01_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
SapB_2
HTH_33
Motif
Other DBs
NCBI-ProteinID:
QDC43761
UniProt:
A0A5B8CR75
LinkDB
All DBs
Position
804405..806753
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AA seq
782 aa
AA seq
DB search
MQFSEQWLRSMVNPAMDTAQLGHALTMAGLEVEELTPVAPVFSRVVVAEIIETAKHPDAD
RLQVCKVKVGEEILQIVCGAPNARAGLKAPCALVGAELPGIQIKQAKVRGVESFGMMCSA
KELGIATEANGILELPADAPVGSDIRDYLSLNDSTYTLKLTPNRADCLSILGIARDVVAM
TGTPMTVPVITPAPITSEISKQVALHATEACPAYYGRVIAGVNAQANTPAWMVQRLERSG
IRSISALVDITNYVLLEQGQPLHAFDLSLLQGDVQVRFAHAGEKLSLLNDTEVTLKADDL
VIADAQGPVALAGIMGGKPTSVSHSTRAIFLESAFFTPQVMAGKARRLGLSTDSSYRFER
GVDFGNTLNALERATALVLEICGGQAAAVTAVTAQLPQRNVVALRHAYLLSVLGIEVSLA
QVGQLLTQLGFAYTETAGVFQVTAPSYRFDIAREEDLIEEVARLHGYEHIPALTPVAPQG
MLVAPEASRSKHWLCDVMVSHGFQEVVTYSFVDASWERDLYGNPQPITLKNPIASNLSVM
RSGLWGGLLEALDYNLKRQQTRAMLFEVGARYAKGTEGFVETLTLSGLVYGSVQPEQWAT
AARAFDFYDAKAYVEALFAQPVRFVVEHHPALHPGQSARVYVGDQAVGWLGKLHPQWQQQ
YALTHACYLFELDAQAALATQVPSYTEVSKFLPVRRDLAMVVDQDVSAQVMIDAVIAEQI
PQLQTVKLFDVYHGKGVPENKKSLAFLVLMQDTCKTMVDEEVDAIVSQILNNWSSKFAAS
LR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccgaacaatggttacgttctatggtaaatccagcaatggataccgcgcaa
ttaggtcatgcattgaccatggcggggcttgaagtcgaagaattgacgccagtcgcacct
gtgtttagtcgcgtagtagtggctgaaattattgaaactgccaaacatccagatgctgac
cgtttgcaggtgtgcaaggtaaaagtcggtgaggaaattttgcaaattgtctgcggcgca
cccaatgcacgtgcaggcttgaaagcgccgtgtgcgctggtgggcgctgagttgccgggc
atacaaatcaaacaggcaaaagtgcggggtgttgagtcatttggcatgatgtgctctgcc
aaagagctgggcattgcgacagaagcgaacggtattctggagttgccagcggatgcgcct
gttggcagcgatattcgtgattacttgtctttaaacgatagcacctacaccctaaagctc
acccctaaccgtgccgattgcctgagtattttggggatcgcacgcgatgtggttgcgatg
actggcacaccgatgaccgtgccggtgattacgcccgcgccgatcactagcgaaatcagc
aaacaagtcgcattgcatgcgacagaagcttgccctgcttactatgggcgggtgattgcc
ggcgtcaatgcgcaggccaatacgccagcgtggatggtacaacgcttggagcgcagcggc
atccgcagcatcagtgcgctagtggacatcaccaattatgtattgctcgagcagggtcaa
cccttgcacgcctttgatttgagtttgttgcaaggcgatgtgcaggtacggtttgcacat
gcgggcgaaaaattatctttgctcaatgatactgaggtgacgctgaaagccgatgatctg
gtgattgctgatgcgcaaggaccagtggcgctggcaggaattatgggcgggaaacccaca
tctgtgagtcattccacccgagctatcttcttagaaagcgctttttttacaccccaagtg
atggccggtaaagcgcgtcgtttaggcttgagcactgattcgtcctaccgttttgaacgt
ggggtagattttggcaacaccttgaatgcattggaacgcgcaacggccttggtattagag
atttgtggtggccaagcggcggcagtcactgcggtgaccgcccaattgccccaacgcaat
gtggtggctttgcgccatgcttatttgttgtcagtcctcggcattgaggtgagtctggca
caggtcggccaattgttgacacaattaggcttcgcctacaccgagaccgcgggcgtattt
caggtgacggcccctagttatcgttttgatattgcccgcgaagaagacttgattgaagaa
gtggcccgtttgcatggctatgagcatattccggcactgacaccggtggcgccgcaaggc
atgttagtcgcgcctgaggccagccgtagcaaacattggttgtgtgatgtgatggtcagt
catgggtttcaggaggtcgtcacctacagctttgtcgatgccagctgggaacgtgattta
tacggtaatcctcagccgatcaccctgaaaaatccaatcgccagcaacctcagcgtcatg
cgttctggtttgtggggtggcttgttagaggcattagattacaacctcaagcgtcaacag
acacgtgcgatgttatttgaagttggtgcgcgttatgccaaaggcaccgaaggctttgta
gagaccttgaccttatctggtttggtttatggcagtgtgcaaccggagcaatgggcaaca
gcagcacgtgcatttgatttctatgacgccaaagcttatgtagaggccttgtttgcacag
ccggtgcgctttgtcgttgagcatcatcccgcattgcacccaggtcagtccgctcgcgtg
tatgtgggcgatcaagcggttggttggctaggtaaactgcatccgcaatggcagcaacaa
tacgcattaacgcatgcgtgctacctgtttgaactggatgcacaagctgcccttgcgaca
caagtgccaagctacactgaggtcagcaagttcttacctgtgcgtcgcgatttggccatg
gtcgtcgatcaagatgtctcggcgcaggtcatgatagatgccgtgattgcggagcaaatt
ccgcagttacaaacggttaaattgttcgatgtttatcatggtaaaggtgtgcccgaaaac
aaaaaaagccttgcatttcttgtacttatgcaagatacttgcaagacaatggtcgatgag
gaagtggatgccatcgtgtcacaaatcctcaacaactggtcatccaaatttgctgcatca
ctcagatag
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