Methylophilus medardicus: FIU01_05315
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Entry
FIU01_05315 CDS
T10472
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mmec Methylophilus medardicus
Pathway
mmec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FIU01_05315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmec03019
]
FIU01_05315
03009 Ribosome biogenesis [BR:
mmec03009
]
FIU01_05315
Messenger RNA biogenesis [BR:
mmec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FIU01_05315
Ribosome biogenesis [BR:
mmec03009
]
Eukaryotic type
Pre-60S particles
RNases
FIU01_05315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QDC43998
UniProt:
A0A5B8CRS6
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All DBs
Position
1071581..1072165
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AA seq
194 aa
AA seq
DB search
MTRGTQLATNQDNLIWLDMEMSGLLPDTDRILELAAVVTDAQLNVIAESPVLVVHQSDAV
LDGMDAWNKGTHGRSGLIDKVKASTLNEEAATDAMLAFLQAHVPAGKSPMCGNSICQDRR
FMARYMPRLEQFFHYRNLDVSVFKELSRRWRPDIYAGFKKASRHEALADIYESIDELKYY
REHFLNLTPPTQSE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaggcacacaattggcaactaatcaggacaatttaatctggctggatatggag
atgagtggtttgttaccggatacagaccgcatactcgagctagcggctgtcgttaccgat
gcgcaattgaacgtgattgcggaatcgccggtattggttgtgcatcagtcggatgccgtg
ttggatggcatggatgcgtggaataaaggcacgcatggtcgtagtggtttaattgacaaa
gtcaaagcctcaacgctgaatgaagaggccgcgaccgatgctatgctggcgtttttgcaa
gcgcatgtgcctgctggtaagtcacccatgtgtggcaactctatctgtcaggacagacgt
tttatggcgcgttatatgccgcgtctggagcagttttttcattaccgtaacttggatgtc
agtgtatttaaagagttgtcacgtcgctggcggccagatatctatgcaggctttaagaaa
gccagccgtcatgaagccttagcagatatttatgagtcgattgacgagttgaaatactat
cgagaacactttttgaacttgacgccacctactcagtccgaatag
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