Methylophilus medardicus: FIU01_05355
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Entry
FIU01_05355 CDS
T10472
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
mmec Methylophilus medardicus
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmec03009
]
FIU01_05355 (der)
Ribosome biogenesis [BR:
mmec03009
]
Prokaryotic type
GTPases
FIU01_05355 (der)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ATP_bind_1
SRPRB
ABC_tran
cobW
TniB
Septin
Ras
AAA_24
AAA_18
AAA
AAA_29
AAA_16
VMAP-M5
Motif
Other DBs
NCBI-ProteinID:
QDC44006
UniProt:
A0A5B8CSD7
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All DBs
Position
complement(1081038..1082471)
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AA seq
477 aa
AA seq
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MLPTIVLVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGRGMGASQPYLVIDTGGF
EPTADTGILKEMAKQTLLAIDEADVIIFLVDARAGLTPQEFTIAQTLRKAQRPVLLAVNK
TEGMRKAIVSADFHELGMGEPLSISSAHGEGVRDLIELALETVVEKIAEPAEPVDQDTPR
IAIVGRPNVGKSTLVNALLGEDRVIAFDEPGTTRDSIEIALEKNGKHYTIIDTAGVRKRG
KVFEAVEKFSVVKTMQAIEDANVAILVVDAKDGITEQDAHVAAYIVDAGRALVVAINKWD
GLQDDEREWIKREIDRKLQFLDFAKFHYISALRKKGLNELLASVDVAFKAAMSKLATPQL
TRVLGEATTQHQPPITRGIRPKLRYAHQGGSNPPIVVVHGNHVDGIKASYTRYLEGIFRK
AFQLVGTPLRVQYNQGENPFDKEDERKKGEGLVTMRRRKNEMRAKLKQRNEQNKTKK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctacctaccatcgtacttgtcggccgacccaatgtcggcaaatctaccctttttaat
cgcttaaccagatcgcgtgatgcactggttgcagatttacctggcctaacgcgagatcgc
cactacggacgtggcatgggggcaagtcaaccctatctggtgattgataccggtggcttt
gagcccaccgcggataccggcattctcaaagaaatggctaagcaaaccctgctcgccatc
gatgaagccgatgtcattatctttttggtggatgcccgtgccgggctcacgccacaagaa
ttcaccattgcacaaacattgcgcaaagcacaacgccccgtcctactggcagtgaacaaa
accgaaggcatgcgcaaagccatcgtcagcgcggactttcatgaactaggcatgggtgaa
cccctgtcgatctcatctgcccatggcgaaggggtcagagatttaatcgagctagcacta
gaaacggtggtcgaaaaaattgcagagcccgctgagcccgtcgatcaggatacgcccaga
atcgcgattgttggccgaccaaacgttggtaaatcgacactggtgaatgcattattgggc
gaggaccgcgtgattgcttttgacgaaccggggaccacccgcgattcgattgaaatcgcg
cttgaaaaaaatggcaagcattacaccattattgacaccgctggtgtgcgtaaacgcggc
aaagtgttcgaagcggtggaaaaattttctgtagtgaaaactatgcaggcaattgaagac
gccaatgtggcgattctcgtcgttgatgctaaggatggaatcactgagcaagatgcgcac
gtcgccgcttatattgttgacgctggccgcgcgttggtcgttgccatcaacaaatgggat
ggcctgcaagatgacgaacgcgagtggatcaagcgtgaaattgatcgcaaactgcagttt
ttggattttgctaagtttcactatatctcagctttgcgtaaaaaaggcctcaatgagcta
ttggcctcggtcgatgtcgcctttaaagctgccatgagtaaactcgccaccccacaactc
actcgagttctcggggaagccaccacgcaacatcagccgccgatcacccgcggcattcgt
cccaagttacgctacgcccaccaaggcggaagcaatccaccgattgttgtcgtgcacggc
aatcatgtggatggcattaaagcgagctacacccgttacctggaaggcattttccgcaaa
gcctttcaactggtaggcacacctctgcgcgtgcaatacaatcagggcgaaaatccgttt
gataaagaggatgagcgcaaaaaaggcgaagggttagtgacgatgcgccgccgtaaaaac
gagatgcgtgccaagcttaaacagcgcaatgagcaaaacaaaaccaaaaaataa
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