Methylophilus medardicus: FIU01_05970
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Entry
FIU01_05970 CDS
T10472
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mmec Methylophilus medardicus
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmec03032
]
FIU01_05970
03036 Chromosome and associated proteins [BR:
mmec03036
]
FIU01_05970
03400 DNA repair and recombination proteins [BR:
mmec03400
]
FIU01_05970
DNA replication proteins [BR:
mmec03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIU01_05970
Chromosome and associated proteins [BR:
mmec03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FIU01_05970
DNA repair and recombination proteins [BR:
mmec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FIU01_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF937
ACP_syn_III_C
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QDC44114
UniProt:
A0A5B8CS25
LinkDB
All DBs
Position
1213245..1213517
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDHIASAAGISKAAAARALDATTEAISGALKKGDLVTLIGFGTFYVGERSARSG
RNPRTGATINIKAAKSPKFRAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcagaattgatagatcatatagcaagtgctgctggtatttctaaagccgct
gcggctcgtgctctggatgcaacaactgaagctatttccggcgcattaaaaaaaggtgat
ctggtgaccttgattggttttggtacattctatgtaggtgagcgttctgcccgttctggc
cgtaatcctcgtaccggcgcaacaattaacattaaagctgctaaatctcctaaatttagg
gctggtaaaggtcttaaagatgctgtaaactag
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