Methylophilus medardicus: FIU01_06015
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Entry
FIU01_06015 CDS
T10472
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
mmec Methylophilus medardicus
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmec01011
]
FIU01_06015
Enzymes [BR:
mmec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FIU01_06015
Peptidoglycan biosynthesis and degradation proteins [BR:
mmec01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FIU01_06015
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
QDC44120
UniProt:
A0A5B8CSJ8
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All DBs
Position
complement(1221460..1223004)
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AA seq
514 aa
AA seq
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MRFNTLLLWITFSAFPIWASAESVEPAIVSDDNASYDETYGGPASESYNSSYQFEDSLSL
QESLWDRVRDGFNMPDIDSTYTNKHEQWYASRPDYVSRMLERSKKYLYHIVVEVEKRGMP
TEIALLPMIESGFNPKALSTSKASGIWQFIPSTGKDFGLKQNYWKDSRKDVTAATQAALN
YLQKLYTMFGAWDLALAAYNAGEGTVARAIERNRQLGLPTDYQHLSLPDETRNYVPKLQA
IKNIIFRPENYGLTLNEIPNRPYFTTVQAPNKIDAKLAAELAGISLEEFNALNPSFTRPV
LITENSYQKLLLPTWAASNFTNNLNGYSRPLSSWHSYQPKRGERLGAIANQFGISIYELS
ASNNLKPNRNLIVRRPLLVPASVQSGLTRPIDVAAMAQLPIEVPIETTSTAQSRTFSHKV
KQGDTLAKLAKRYGISSKQIMQQNKLKSKNLALGQVLQLEKPEPNAGDTSHSRTIKNNRH
SAPKKTTAHSKTRSSSVADKKTMTNTHKKTKQTK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaacacattattgctttggatcactttttcagcgtttcccatatgggcctca
gctgaatctgtcgagcccgcaatcgtgtcggatgacaatgcgagttatgatgaaacttat
ggggggccagcctccgagagctacaattctagctatcagtttgaagactcgctgagtctg
caagaaagcttgtgggatcgcgtgcgcgatggattcaatatgcccgatatcgactccacc
tacaccaacaagcatgagcaatggtatgcctcgcgcccggactatgtctctcgtatgctc
gagcgcagcaaaaagtatctctatcatattgtggtagaagtcgaaaaaagaggcatgcca
accgaaattgcgttgctacccatgattgaaagcggctttaacccgaaggcattgtcgacc
agcaaggcctctggcatctggcaatttattccctccaccggtaaagacttcggcctgaaa
caaaactactggaaagactcgcgtaaagatgtcaccgcggcgacgcaggccgcactcaat
tacctgcaaaagttatacaccatgtttggggcctgggatttagcgctggccgcgtacaat
gcgggtgaaggcactgtggcccgtgccattgagcgtaaccgtcagctaggactgccaacc
gattaccagcatttgtccttgccggatgaaacgcgcaattatgtgcccaaattacaggcg
attaaaaatatcatttttcggcccgaaaactatgggttaacgctgaatgagattcccaac
cggccttatttcaccacggtgcaggctcccaacaaaattgacgccaaactggctgcggag
cttgcaggcatttcactcgaagaatttaatgcgctcaacccgagttttacgcgccccgta
ctcattacagaaaacagttatcagaaactgctgttacccacttgggcagccagcaacttc
accaataatctcaatggttacagccgtccgctgtccagttggcacagttatcaacccaaa
cgaggggaacgtttgggggcgatcgccaaccaatttggcatcagtatttatgaactgagc
gccagcaacaacctgaaacccaatcgtaacctgatcgttcgcagaccattattggtcccc
gccagtgtgcaatccggtctaacgcgacccattgatgttgcagcaatggcacaactaccg
attgaggtccccatcgaaaccacgtctaccgctcaatcgcgcaccttctcgcacaaggta
aaacaaggggataccctagcaaaactggcaaaacgttatggcatcagcagcaaacagatc
atgcaacaaaataagttaaaatcaaaaaatctggcgcttggccaagtgttgcagctggaa
aaaccggaaccaaacgccggcgatacgagtcactcacgcacgataaaaaataatcgacac
agtgcgccgaaaaaaacgactgcccacagcaagacacgttcaagttcggttgcagataaa
aaaaccatgaccaatacacataaaaaaaccaaacaaactaaatag
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