Methylophilus medardicus: FIU01_06875
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Entry
FIU01_06875 CDS
T10472
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mmec Methylophilus medardicus
Pathway
mmec03030
DNA replication
mmec03430
Mismatch repair
mmec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU01_06875 (holB)
03430 Mismatch repair
FIU01_06875 (holB)
03440 Homologous recombination
FIU01_06875 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmec03032
]
FIU01_06875 (holB)
03400 DNA repair and recombination proteins [BR:
mmec03400
]
FIU01_06875 (holB)
Enzymes [BR:
mmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU01_06875 (holB)
DNA replication proteins [BR:
mmec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU01_06875 (holB)
DNA repair and recombination proteins [BR:
mmec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU01_06875 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
Parvo_NS1
NPHP3_N
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QDC44271
UniProt:
A0A5B8CSI1
LinkDB
All DBs
Position
complement(1416556..1417548)
Genome browser
AA seq
330 aa
AA seq
DB search
MINKLYPWQDALFHQWMQAGETRHHALLLYGKAGIGKLNFAQTMAAGLLCLQPQHGFACG
ACQSCHWLSEGAHPDFKEITPEDDDSTEGSKKKTRKRQQILIDQIRVLNDYLSLSAHRVQ
GMRVVLIHPLEAMNVAASNALLKLLEEPPQRTQFLLVSHQRQALLPTVLSRCMQVEMPVP
SREQGLQWLQTQAVPDAEWLWFYSGGAPTAVQQEGVDLYGWFQQCRPHLIGGAKMDVALA
VSVLIKQGMEQAIQALQKWLLDLWLSCHQQPLRYHPADVAGLQGLAAQVNLSRLLAFQQQ
LNRFKMTAQHPLNQELQLEQLLLQYKKMFG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgattaataaactttatccttggcaagacgcgctgtttcaccaatggatgcaagcgggt
gaaacaaggcatcacgctttgctgttatacggaaaagccggcatcggaaaactcaatttt
gcccaaaccatggctgccggattgctctgtttgcaacctcagcacggctttgcttgtggt
gcatgccagtcctgtcattggttgtcagagggcgcgcatccggactttaaagaaatcacg
cccgaagatgatgacagcacggaaggtagcaaaaagaaaacacgcaagcggcaacaaatt
ttgatcgatcagattcgtgtcttaaatgattatctatcgctcagcgcgcatcgcgtgcag
ggcatgcgagtggtgttgattcatccgctagaggccatgaacgtggcggcctcaaatgca
ttactcaagctccttgaagagcctccgcaacgaacacagtttctgctggtctcacaccag
cgtcaggctttgttaccgactgtgttgagccgctgtatgcaggttgaaatgcccgtgccc
agccgtgagcagggcttgcaatggttgcaaacgcaagccgtgcctgatgcggagtggttg
tggttctacagtggcggtgcgccgacagcggtgcaacaagagggtgtcgatttatatggt
tggtttcagcaatgccggccgcatctgatcggcggcgctaagatggatgtggctctggca
gtgtcagtgttgatcaagcagggaatggagcaagcaattcaggccttgcaaaagtggttg
ttagatctttggctgtcctgtcatcagcagcctttacgctatcatccagcggacgttgcg
ggattgcagggcttggccgcgcaggtaaatttgtcgcgcttgctggcgtttcaacaacag
ctaaatcgttttaaaatgaccgcacagcacccactcaaccaagagctgcaactggagcag
ttattattgcaatataaaaaaatgtttggctag
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integrated database retrieval system
